PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05027.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 242aa    MW: 26035.1 Da    PI: 6.5167
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05027.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.4e-164393155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++ykGVr +k +g+Wv+eIr p++   r r++lg+++ +e+Aa+a +aa  +l+g
  Zmw_sc05027.1.g00040.1.am.mk 43 KKYKGVRLRK-WGKWVSEIRLPNS---RERIWLGSYDAPEKAARAFDAAFVCLRG 93
                                  59******99.**********933...5*********************999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.33E-2543106No hitNo description
PROSITE profilePS5103220.91644104IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-1844106IPR016177DNA-binding domain
SMARTSM003801.3E-2844110IPR001471AP2/ERF domain
PfamPF008475.6E-94492IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-2644106IPR001471AP2/ERF domain
PRINTSPR003672.8E-84556IPR001471AP2/ERF domain
PRINTSPR003672.8E-86783IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MRRRRPTRHS RVESPVNAPH APAETSISGM SSSPEMEGGR ESKKYKGVRL RKWGKWVSEI  60
RLPNSRERIW LGSYDAPEKA ARAFDAAFVC LRGSGAAGAD LNFPDSPPPC RASCSIDPQE  120
VQAAALSHAN RAAVTAREAA AALMDVDDSP PAATLSREAL AHGAGFLDAG RGIEVVAPVR  180
ADGSIDWRPV MAHPPPLYSP IGWGSNAYDF LQMPPAAEAA DEDMEETIHG ASASLWSFDS  240
RY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025794487.11e-104ethylene-responsive transcription factor ERF017-like
TrEMBLA0A3G2LN091e-172A0A3G2LN09_9POAL; ERF transcription factor
STRINGPavir.J00593.1.p1e-102(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144