PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05154.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 475aa MW: 50729.3 Da PI: 9.1594

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05154.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.1	2.8e-07	347	379	3	32
HHHHHHHHHHHHHHHHHHHHHHCTSCCC..... CS HLH 3 rahnerErrRRdriNsafeeLrellPkas...k 32 +h+ +Er RR++i +++ L++l+P++s + Zmw_sc05154.1.g00070.1.am.mk 347 NSHSLAERLRREKISERMKLLQDLVPSCSkmaH 379 58*************************865551 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	1.33E-4	342	376	No hit	No description
SuperFamily	SSF47459	1.83E-7	342	377	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	9.464	344	399	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.1E-4	347	379	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.2E-7	347	394	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence Send to blast
MTAWSSTGEC TAPRPASAAV HKTGKKKESA EPLLSYGLLL FIRNKKDEER KRQLSCAVVE 60 SKVKQEVLAS ACCRTVRLLR CRVTVARSMD MNNESNEKGM ESNRASSGAA GIPVEWQNQF 120 SAAFPCPPAQ QQASMMDSFA SAGLWASTSQ AMGLSDAMSA GRGSGFLAPE PGFLQQGLGH 180 FPVDSGFIER AARASCIGGN GGGVMAANAG FGAADQPMNN AFSGSSEALL DHQREDGNGK 240 AETDLGRSGH GEVRSSEAAG GDCSSKGTSE SKKRRRPNET KLGADQVQSS NLPADSANES 300 VHSKDKGEES SPATTTGKSK GKGAKETSES QKEEYIHVRA RRGQATNSHS LAERLRREKI 360 SERMKLLQDL VPSCSKMAHA MNGSFSDVTQ MAYPSQGSQD LSMRPSQNGG EPLIHRKTTV 420 RFAGTNEADS RRTQWTRLET GDDDEAKASR ARPYAARASD PTRVCAAGSP RSRWV

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence Send to blast

MTAWSSTGEC TAPRPASAAV HKTGKKKESA EPLLSYGLLL FIRNKKDEER KRQLSCAVVE  60
SKVKQEVLAS ACCRTVRLLR CRVTVARSMD MNNESNEKGM ESNRASSGAA GIPVEWQNQF  120
SAAFPCPPAQ QQASMMDSFA SAGLWASTSQ AMGLSDAMSA GRGSGFLAPE PGFLQQGLGH  180
FPVDSGFIER AARASCIGGN GGGVMAANAG FGAADQPMNN AFSGSSEALL DHQREDGNGK  240
AETDLGRSGH GEVRSSEAAG GDCSSKGTSE SKKRRRPNET KLGADQVQSS NLPADSANES  300
VHSKDKGEES SPATTTGKSK GKGAKETSES QKEEYIHVRA RRGQATNSHS LAERLRREKI  360
SERMKLLQDL VPSCSKMAHA MNGSFSDVTQ MAYPSQGSQD LSMRPSQNGG EPLIHRKTTV  420
RFAGTNEADS RRTQWTRLET GDDDEAKASR ARPYAARASD PTRVCAAGSP RSRWV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012698809.1	1e-145	transcription factor bHLH49 isoform X2
TrEMBL	K3ZTF2	1e-143	K3ZTF2_SETIT; Uncharacterized protein
STRING	Si029882m	1e-144	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2909	37	85