PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05735.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 432aa MW: 46751.3 Da PI: 10.2339

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05735.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	94.8	9e-30	183	280	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 +++rlws De+v+L+Gl ++ak+g+ +++di++++ + +++s+kv+++ql++K+rrLK+K+++ +++k+g++p+f Zmw_sc05735.1.g00030.1.sm.mk 183 RPSRLWSTGDELVILRGLAAYRAKHGVlpGSMHDISKLHGRIGNELSVKVTTTQLSDKVRRLKQKYHQLATRTKNGRDPDF 263 679**********************877888******************************************** PP DUF573 81 skehdqkifelskkiWg 97 +++d++++el kk+Wg Zmw_sc05735.1.g00030.1.sm.mk 264 PTPQDHSVYELGKKVWG 280 **************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	2.0E-27	185	280	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence Send to blast
MAPKRPAAAA ASGSASEASD AEMDASRHPS SPSASKTPPS NPNPKPAPAA EDSAAAGSDS 60 GAAYDSDADH RPAPPKPAAS PSRRAARRSP KPRSRSPTPG ANSDSDGSAA PVASEADPAA 120 DSEDVNASPL PPPRSSRAEA VIVKPLSSRP MDPPRRSVPS FSEPRPKRPR SAAVPAVMEH 180 LKRPSRLWST GDELVILRGL AAYRAKHGVL PGSMHDISKL HGRIGNELSV KVTTTQLSDK 240 VRRLKQKYHQ LATRTKNGRD PDFPTPQDHS VYELGKKVWG AIAGTGGSVI AEYENAGAGY 300 SEEERQNVES DENMDSGRDD RERKNKRLKP IALANGYGKR FGATSASSRG KIEFEKGKDA 360 YPYLWETVED LSRQHPNGVA FKKAFEMIEG PKARVMEEKL RKFRVTEVRH QLRRMELMKE 420 TVKMVLDALE DA

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence Send to blast

MAPKRPAAAA ASGSASEASD AEMDASRHPS SPSASKTPPS NPNPKPAPAA EDSAAAGSDS  60
GAAYDSDADH RPAPPKPAAS PSRRAARRSP KPRSRSPTPG ANSDSDGSAA PVASEADPAA  120
DSEDVNASPL PPPRSSRAEA VIVKPLSSRP MDPPRRSVPS FSEPRPKRPR SAAVPAVMEH  180
LKRPSRLWST GDELVILRGL AAYRAKHGVL PGSMHDISKL HGRIGNELSV KVTTTQLSDK  240
VRRLKQKYHQ LATRTKNGRD PDFPTPQDHS VYELGKKVWG AIAGTGGSVI AEYENAGAGY  300
SEEERQNVES DENMDSGRDD RERKNKRLKP IALANGYGKR FGATSASSRG KIEFEKGKDA  360
YPYLWETVED LSRQHPNGVA FKKAFEMIEG PKARVMEEKL RKFRVTEVRH QLRRMELMKE  420
TVKMVLDALE DA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001144670.1	1e-168	GLABROUS1 enhancer-binding protein-like
TrEMBL	A0A3L6TCP4	1e-180	A0A3L6TCP4_PANMI; Uncharacterized protein
STRING	GRMZM2G134866_P02	1e-167	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2671	35	87