PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05804.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 359aa MW: 39274.2 Da PI: 9.8918

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05804.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80	5.1e-25	11	85	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 e + w+fF++r++ +a+g r++r+t +gyWka g+ +v++++++++g++kt+vfy+grap+g+kt+W m+eyr+ Zmw_sc05804.1.g00010.1.am.mk 11 EGEPWFFFCPRQEGEARGGRPSRVTPTGYWKAAGTPAAVYAADRRAIGVRKTMVFYRGRAPSGTKTTWKMNEYRA 85 5578*********************************************************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	29.733	1	126	IPR003441	NAC domain
SuperFamily	SSF101941	4.32E-26	10	124	IPR003441	NAC domain
Pfam	PF02365	4.3E-13	13	84	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence Send to blast
IHERLCGGAG EGEPWFFFCP RQEGEARGGR PSRVTPTGYW KAAGTPAAVY AADRRAIGVR 60 KTMVFYRGRA PSGTKTTWKM NEYRALQYDA GGTAEYGSSS SAHAASPLSL PSQLRSEFSL 120 CRLYTRSGVL RQFDRRPLAG AASCPGEGPA EPSMATAASL DDDDGSGEGT LNVPGILDRE 180 ERTGAVDHVR FTCRAQALDH HFLPGRVPSR EAHSCRQCTS RESERGRPLG AALDDRAIQL 240 LRCSDVQSGT RLPARTAHSQ VSSLASLSSP IFHGLVEWIW IPGRMEWQVR FRDSVLLSAH 300 FCRRGALPLS LCTFPEVDSL GNQQRGTTAT TRVSLRLRFP EGAAQRTGNK SRLKLNMIR

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence Send to blast

IHERLCGGAG EGEPWFFFCP RQEGEARGGR PSRVTPTGYW KAAGTPAAVY AADRRAIGVR  60
KTMVFYRGRA PSGTKTTWKM NEYRALQYDA GGTAEYGSSS SAHAASPLSL PSQLRSEFSL  120
CRLYTRSGVL RQFDRRPLAG AASCPGEGPA EPSMATAASL DDDDGSGEGT LNVPGILDRE  180
ERTGAVDHVR FTCRAQALDH HFLPGRVPSR EAHSCRQCTS RESERGRPLG AALDDRAIQL  240
LRCSDVQSGT RLPARTAHSQ VSSLASLSSP IFHGLVEWIW IPGRMEWQVR FRDSVLLSAH  300
FCRRGALPLS LCTFPEVDSL GNQQRGTTAT TRVSLRLRFP EGAAQRTGNK SRLKLNMIR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-17	10	87	69	144	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-17	10	87	69	144	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-17	10	87	69	144	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-17	10	87	69	144	NO APICAL MERISTEM PROTEIN
3swm_A	1e-17	10	87	72	147	NAC domain-containing protein 19
3swm_B	1e-17	10	87	72	147	NAC domain-containing protein 19
3swm_C	1e-17	10	87	72	147	NAC domain-containing protein 19
3swm_D	1e-17	10	87	72	147	NAC domain-containing protein 19
3swp_A	1e-17	10	87	72	147	NAC domain-containing protein 19
3swp_B	1e-17	10	87	72	147	NAC domain-containing protein 19
3swp_C	1e-17	10	87	72	147	NAC domain-containing protein 19
3swp_D	1e-17	10	87	72	147	NAC domain-containing protein 19
4dul_A	1e-17	10	87	69	144	NAC domain-containing protein 19
4dul_B	1e-17	10	87	69	144	NAC domain-containing protein 19