PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05865.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 947aa    MW: 102641 Da    PI: 10.686
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05865.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18407457256
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                    y+GVr+++ +g+WvAeIr p +   r+r +lg+f+tae+Aa a+++ + kl+ge
  Zmw_sc05865.1.g00020.1.am.mk 407 LYRGVRQRH-WGKWVAEIRLPQN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 457
                                   59******9.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.10E-30406466No hitNo description
PROSITE profilePS5103222.932407464IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.1E-32407465IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-22407465IPR016177DNA-binding domain
SMARTSM003806.1E-39407470IPR001471AP2/ERF domain
PRINTSPR003673.1E-10408419IPR001471AP2/ERF domain
PfamPF008479.2E-12408457IPR001471AP2/ERF domain
PRINTSPR003673.1E-10430446IPR001471AP2/ERF domain
SuperFamilySSF500901.77E-22866943IPR008990Electron transport accessory protein-like domain
Gene3DG3DSA:2.30.30.502.0E-30866945No hitNo description
ProDomPD0150342.0E-35866942IPR004207Ferredoxin thioredoxin reductase, alpha chain
PfamPF029413.3E-25867940IPR004207Ferredoxin thioredoxin reductase, alpha chain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0015979Biological Processphotosynthesis
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 947 aa     Download sequence    Send to blast
MPARNTCLNK NKTGRDFFAP GVLSCEEQWR LERKESNREG IKSSVYGFVL DRCRPARATA  60
GQQSKENAHR KPRDACRTPF APARIAASVC HAESGAEGVN ARGARAADHD PFPPHNDARL  120
FFVVSSVERL HALTARPIGS QRHSEHRSPA WQRLARSRPV PRARAAACSS MQFASGGRPG  180
DRHTHSSQLG ESVGMDAADR GGGRGRGRKW KGKAVSAAGP ERPRLAPVLE DAPAATFLRP  240
LKKPRSPDQL RRSVSSLSSA PASPDSSSVS NPLSPPATSW PPTRHVFPFA YDPAPAASPD  300
AAAGAGPRVL PLFQYSSAYQ QQPLPPQQQP PVQRQQMISL GGDNQQQQFG AASPLFPPQL  360
VAPEVQQQML LRYWSEALNL SPRGFRGGAV PPALFQHLLR AQAPPKLYRG VRQRHWGKWV  420
AEIRLPQNRT RLWLGTFDTA EDAAMAYDRE AFKLRGENAR LNFPDLFLGK GRVGGSGRTS  480
ASAAASCSSS SSSAPPTPDE IRAKQAQEHH GEEPASKNSE AKPQIPEAEQ AENSEPQQYS  540
QVQTADQQSG DCSTAMFQPP VTSSGVWGPA DEAWFSAWGP GSSVWDYDMD NAHAGLFLQS  600
RFASESTGID FVSSAPDVAM TPAPAAGPAM AAASSPPPPP CPPLPHSPTY VSPYLFRVGN  660
GWRRASLQAS WRDEQSPRQA AKRELGSVKW RVAGRKRRAR WRGCGEQPQP GVRSRLIQGS  720
SDRGASISGK TSQNHCLALA RLLLLVVPGS LLHLSLPSFY RSSSLPPPPT TCSTQHLAIL  780
HPAAAVGRPH APSMATATAS VAPPSTSTSS FLLLRRRRLP AARAPAPAFR CLVPLPRRRA  840
RIQVALTSEV SSSDDVAAEE AAAAPKIGRR VRVTAPLRVY HVVKAPDLDV QGMEGVVKQY  900
VCVWKGKRIT ANFPFKVEFS VDVDGQPKPV RFFVHLREDE FEFVDGE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-19403464163ATERF1
3gcc_A1e-19403464163ATERF1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36913268