PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06011.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 237aa    MW: 25672.3 Da    PI: 5.5389
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06011.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY50.63.9e-161382359
                                  EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY 23 sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                                  +YYrC+s+ gCp++k+vers++dp++++itY++eHnh+
  Zmw_sc06011.1.g00010.1.am.mk  1 GYYRCSSSkGCPARKQVERSRTDPSMLVITYNSEHNHP 38
                                  5*****998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081119.852140IPR003657WRKY domain
SMARTSM007742.8E-9139IPR003657WRKY domain
PfamPF031062.1E-13138IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-15140IPR003657WRKY domain
SuperFamilySSF1182907.45E-13240IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
GYYRCSSSKG CPARKQVERS RTDPSMLVIT YNSEHNHPWP TQRNALAGST RSHHAKNNGN  60
NSSSKKNSSL QRPMVKAEWD QTAAAEATTT TTTSTSNSTP PATSVKEEEM MASEMEKAGV  120
QQHAGHHDTS AVTLDPGDLM QQMFNQSYRP MIPEGGHHVD DFFADLAELE SDPMSLIFSK  180
EYMETKPGGE PAAKEMAGPT KSLVDPLFNM LDWGATTAAV ATFAGSSSLE QQGESGL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025791328.17e-91probable WRKY transcription factor 14
TrEMBLA0A2T7FAW85e-90A0A2T7FAW8_9POAL; Uncharacterized protein
STRINGPavir.Ab02810.1.p3e-92(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888