PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06031.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ERF

Protein Properties

Length: 680aa MW: 72286.8 Da PI: 10.7494

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06031.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.6	2.4e-11	244	292	2	54
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 +y+GV+ ++ +++ A I+dp++ ++r++lg+++t+eeAa a++aa + ++ Zmw_sc06031.1.g00040.1.am.mk 244 RYHGVT-SRYGNKFGAMIQDPKT---KRRVWLGTYDTPEEAACAYDAAVRTMK 292 6999.67799****954...5*******************98876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00380	7.8E-16	244	306	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	6.54E-13	244	300	IPR016177	DNA-binding domain
PROSITE profile	PS51032	14.341	244	300	IPR001471	AP2/ERF domain
CDD	cd00018	3.00E-15	244	302	No hit	No description
Gene3D	G3DSA:3.30.730.10	1.3E-18	244	301	IPR001471	AP2/ERF domain
Pfam	PF00847	8.1E-5	246	291	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence Send to blast
MTRTNGLRAP HTCPITSSTD PAAAKFFLSE AIAGVDATGG RSPRAWRFSF GSRPGSEGRR 60 PKRPNPSREP GPRSPEDPPL QPTLLKGLRR VCMLRPNKYT NPDGPERSSY SSPSRAPLKR 120 KLTAPARSRS HSSSPPALKS ELPPRARTRV TRPKIPEQKR KERLVCSALQ QWQAMKQRGG 180 ASETRAGGCL YGMHNISLNN PLALGQQWGL GMEGSIREYA RRAGAKVRAD RTAQGREPSS 240 PGRRYHGVTS RYGNKFGAMI QDPKTKRRVW LGTYDTPEEA ACAYDAAVRT MKSNPKFNFP 300 ELIRGEEEKS AAAVLAHFAE TKRKRKLAEE AVPPPSAPAP AGDVVGLPEP PTSFPGEEDA 360 LAALKMLQGH GEASSKNKAL EAVVSSLSPA PSSSSAPAAP TSHYASTPVS TAFKNPFFVP 420 TSAGSASAFR FTTPVLTPAL LNFMFPTSHA MALPPSFHSE PSPAAPSPPA PAPAVHSVPV 480 FDPAPLAFHY PNWSAPPPGF HLAPAPAAPA DKSVVSTAPS SSALAPAPDN ASASHFASFF 540 APTPAPPAAF HLPDTTAPPP GFHPAPAPAA PATTPLTWQL MYQRHLALSS LQAQQSLRTL 600 RPLLSMSPLG AAIMNTSSVS QPYGSSSSGA PEISEAELAG YRSLYRMLER EAAGGGLGDV 660 RIDDPGTQDR SRKKKRRGEA

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence Send to blast

MTRTNGLRAP HTCPITSSTD PAAAKFFLSE AIAGVDATGG RSPRAWRFSF GSRPGSEGRR  60
PKRPNPSREP GPRSPEDPPL QPTLLKGLRR VCMLRPNKYT NPDGPERSSY SSPSRAPLKR  120
KLTAPARSRS HSSSPPALKS ELPPRARTRV TRPKIPEQKR KERLVCSALQ QWQAMKQRGG  180
ASETRAGGCL YGMHNISLNN PLALGQQWGL GMEGSIREYA RRAGAKVRAD RTAQGREPSS  240
PGRRYHGVTS RYGNKFGAMI QDPKTKRRVW LGTYDTPEEA ACAYDAAVRT MKSNPKFNFP  300
ELIRGEEEKS AAAVLAHFAE TKRKRKLAEE AVPPPSAPAP AGDVVGLPEP PTSFPGEEDA  360
LAALKMLQGH GEASSKNKAL EAVVSSLSPA PSSSSAPAAP TSHYASTPVS TAFKNPFFVP  420
TSAGSASAFR FTTPVLTPAL LNFMFPTSHA MALPPSFHSE PSPAAPSPPA PAPAVHSVPV  480
FDPAPLAFHY PNWSAPPPGF HLAPAPAAPA DKSVVSTAPS SSALAPAPDN ASASHFASFF  540
APTPAPPAAF HLPDTTAPPP GFHPAPAPAA PATTPLTWQL MYQRHLALSS LQAQQSLRTL  600
RPLLSMSPLG AAIMNTSSVS QPYGSSSSGA PEISEAELAG YRSLYRMLER EAAGGGLGDV  660
RIDDPGTQDR SRKKKRRGEA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	672	676	KKKRR

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP35333	3	4