PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06125.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 179aa MW: 20074.5 Da PI: 8.6494

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06125.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.7	9.3e-12	81	137	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 e +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L +el++ ++ + Zmw_sc06125.1.g00020.1.sm.mk 81 EERRRRRMVSNRESARRSRMRKQRQLSELWAQVVYLRGANRRLLDELNRAIRDCSDV 137 67899******************************************9987777765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.2E-10	74	136	No hit	No description
SMART	SM00338	2.4E-12	79	143	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.0E-9	80	137	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.473	81	144	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.88E-10	83	132	No hit	No description
PROSITE pattern	PS00036	0	86	101	IPR004827	Basic-leucine zipper domain
CDD	cd14702	9.46E-15	88	135	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence Send to blast
MLHQHHYHGG LASLHCLPPP DPAFHAHYHS NMITMVPSSF NFSPAAHEPI CEAPAVAGKS 60 SAGYGGVEDV YSSHSTVMAE EERRRRRMVS NRESARRSRM RKQRQLSELW AQVVYLRGAN 120 RRLLDELNRA IRDCSDVRCE NARLEKEKAE LNTKLQGLTQ AQNTTMPSSS GPHDDTATA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	102	RRSRMRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025799413.1	3e-81	bZIP transcription factor 2-like
TrEMBL	A0A2T7ETI3	3e-80	A0A2T7ETI3_9POAL; Uncharacterized protein
STRING	Pavir.Ba01782.1.p	2e-75	(Panicum virgatum)
STRING	Pavir.Bb02514.1.p	8e-75	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1186	35	126