PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06283.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

TALE

Protein Properties

Length: 391aa MW: 42539.9 Da PI: 5.7226

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06283.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.2	1.4e-08	155	187	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ryp+ +e+ LA+++gLt +q+++WF N R + Zmw_sc06283.1.g00040.1.sm.mkhc 155 LRYPKDSEKLMLARQTGLTRSQISNWFINARVR 187 59*****************************88 PP
2	BELL	45.7	1.6e-15	101	132	41	72
BELL 41 aglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ag g+akpYt++Al++iSrhFrcLkdai +qi Zmw_sc06283.1.g00040.1.sm.mkhc 101 AGPGAAKPYTAVALQTISRHFRCLKDAINDQI 132 799***************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00574	3.2E-9	45	130	IPR006563	POX domain
Pfam	PF07526	2.9E-7	51	95	IPR006563	POX domain
Pfam	PF07526	2.4E-10	101	128	IPR006563	POX domain
SMART	SM00389	3.7E-6	118	195	IPR001356	Homeobox domain
SuperFamily	SSF46689	4.71E-12	155	197	IPR009057	Homeodomain-like
CDD	cd00086	5.25E-9	156	192	No hit	No description
PROSITE profile	PS50071	10.787	156	191	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	2.6E-17	157	197	IPR009057	Homeodomain-like
Pfam	PF05920	2.9E-12	157	187	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence Send to blast
NTEQSRGASS SAGLAAAADE PDPNKTSFAQ SLALLPLRGA PSAQSEASQA IRNSRYLKAA 60 QELLDEAVNV WKNIKQKAQK EQGDSGRTDG KENEGGPKSE AGPGAAKPYT AVALQTISRH 120 FRCLKDAIND QINVIRKKLG EEESTSGKEG KLTRLRYPKD SEKLMLARQT GLTRSQISNW 180 FINARVRLWK PMIEDMYKEE IGDIEQDSNS SSDNGPRSKG KVASSEDKED LKSSTPRVCE 240 TSQLSESRSS IGTVNIGGAP VGFQNETNPD DSFMNLMLKD QRSNETDGGL LQHNAVAHHP 300 DENARFMAYH LAELGRYGNG NVSLTLGLQH SSSNLSAPNA QQSFPVVGDN DIYNATAPLG 360 VGVSSSDYDS MNQIDQRQRF EQSPLLHDFV A

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence Send to blast

NTEQSRGASS SAGLAAAADE PDPNKTSFAQ SLALLPLRGA PSAQSEASQA IRNSRYLKAA  60
QELLDEAVNV WKNIKQKAQK EQGDSGRTDG KENEGGPKSE AGPGAAKPYT AVALQTISRH  120
FRCLKDAIND QINVIRKKLG EEESTSGKEG KLTRLRYPKD SEKLMLARQT GLTRSQISNW  180
FINARVRLWK PMIEDMYKEE IGDIEQDSNS SSDNGPRSKG KVASSEDKED LKSSTPRVCE  240
TSQLSESRSS IGTVNIGGAP VGFQNETNPD DSFMNLMLKD QRSNETDGGL LQHNAVAHHP  300
DENARFMAYH LAELGRYGNG NVSLTLGLQH SSSNLSAPNA QQSFPVVGDN DIYNATAPLG  360
VGVSSSDYDS MNQIDQRQRF EQSPLLHDFV A

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004963319.1	0.0	BEL1-like homeodomain protein 7
Refseq	XP_004963320.1	0.0	BEL1-like homeodomain protein 7
Refseq	XP_004963321.1	0.0	BEL1-like homeodomain protein 7
TrEMBL	K3Z4G8	0.0	K3Z4G8_SETIT; Uncharacterized protein
STRING	Si021437m	0.0	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP901	38	131