PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06704.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ERF

Protein Properties

Length: 440aa MW: 46127.6 Da PI: 10.0068

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06704.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.7	1.2e-12	2	42	13	56
AP2 13 grWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 gr++AeIrdp r + ++lg+f++ae Aa+a++aa+++l+g+ Zmw_sc06704.1.g00010.1.am.mk 2 GRYAAEIRDP---A-RkTPIWLGTFDSAEAAARAYDAAARSLRGA 42 9******8...2.35***********************995 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51032	16.687	1	49	IPR001471	AP2/ERF domain
SMART	SM00380	2.4E-18	1	55	IPR001471	AP2/ERF domain
Pfam	PF00847	8.4E-6	2	41	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	1.0E-20	2	50	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	7.19E-15	2	50	IPR016177	DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence Send to blast
SGRYAAEIRD PARKTPIWLG TFDSAEAAAR AYDAAARSLR GAAARTNFSA SASAQVAAPS 60 PAIPPAATVA AAATSSHSST VESWSGGIGA PGATIAGATR AAPAAEEDCR SYCGSSSSVL 120 CDDGVSSAGD EAVAPPTRSS PLPFDLNVAD PAAPDEMDWR CDTTCALLLR RDRNSTDRRQ 180 KVNQIKSNAC SFAFKSIRTQ SACCKRPSRQ GPGGIMASLK IESPSSSARP VCVCLRTGRH 240 SPCDLLRDRS VARRESVTSP PTRVLPVATC VCGAGLKRER EREAGRREDV NPGREEAVSF 300 SPATVVPSGS AEEGNSGRNL RKACRHPACG LHSTCFARSC AALSAGETGA HPCPVPNGKA 360 RATAEWKTVT VQHASRQTCD YPGDLSRARQ LWHRRPPVAR RKGTPELGMR RGRDSSAGPR 420 AHTHRPKLPA RGASIGTNGA

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence Send to blast

SGRYAAEIRD PARKTPIWLG TFDSAEAAAR AYDAAARSLR GAAARTNFSA SASAQVAAPS  60
PAIPPAATVA AAATSSHSST VESWSGGIGA PGATIAGATR AAPAAEEDCR SYCGSSSSVL  120
CDDGVSSAGD EAVAPPTRSS PLPFDLNVAD PAAPDEMDWR CDTTCALLLR RDRNSTDRRQ  180
KVNQIKSNAC SFAFKSIRTQ SACCKRPSRQ GPGGIMASLK IESPSSSARP VCVCLRTGRH  240
SPCDLLRDRS VARRESVTSP PTRVLPVATC VCGAGLKRER EREAGRREDV NPGREEAVSF  300
SPATVVPSGS AEEGNSGRNL RKACRHPACG LHSTCFARSC AALSAGETGA HPCPVPNGKA  360
RATAEWKTVT VQHASRQTCD YPGDLSRARQ LWHRRPPVAR RKGTPELGMR RGRDSSAGPR  420
AHTHRPKLPA RGASIGTNGA

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6102	23	47