PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06774.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

CPP

Protein Properties

Length: 200aa MW: 22428.7 Da PI: 9.3791

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06774.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	31.6	3.2e-10	57	77	4	24
TCR 4 kgCnCkkskClkkYCeCfaag 24 ++CnCkks ClkkYC+C++ Zmw_sc06774.1.g00020.1.sm.mkhc 57 RKCNCKKSGCLKKYCDCYQGV 77 79****************965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03638	6.4E-7	57	76	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence Send to blast
MGTGARAAVA RSPSASSSIA CVFPLAHIVL NHVDANLVTT SLDKELPLRS PMDIFRRKCN 60 CKKSGCLKKY CDCYQGVQST VSARIVRTRL GEKETQVGVE IQTMNGHLYP KPLTQVRPES 120 SSFQLTRRPG EEVRGEQWHF SRKPSEDGIS DAMEGHNVIK FQRNNKKPER HMDRFSIPRC 180 IEVMNAMSEL SLIEKSLAPD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004963115.1	4e-64	protein tesmin/TSO1-like CXC 7
TrEMBL	K3Z6R9	1e-62	K3Z6R9_SETIT; Uncharacterized protein
STRING	Si022238m	2e-63	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9610	28	34