PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc06839.1.g00030.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 159aa    MW: 17573.3 Da    PI: 10.0557
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc06839.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.69.3e-11121153132
                                   TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.tWktIartmg 32 
                                   +g+WT+eEde+l++++++ Gg+ +W+t +r  g
  Zmw_sc06839.1.g00030.1.am.mk 121 KGPWTPEEDEKLLQYIQKNGGHgSWRTLPRLAG 153
                                   79*******************9********999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.72E-7107149IPR009057Homeodomain-like
PROSITE profilePS5129412.669116159IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.1E-11119153IPR009057Homeodomain-like
PfamPF002494.0E-8121153IPR001005SANT/Myb domain
CDDcd001677.12E-5123154No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MGAAGCFCPL SADHARVLPP PPVRSLFFPA QDADVWRGKP FRFLRPDSNN CKLLRRRQRP  60
SRYPVHKQQA TDHSPSPWPP LTCMSSKSLL LCVALAVVLF GVVGRGAMGR PPCCDESGLK  120
KGPWTPEEDE KLLQYIQKNG GHGSWRTLPR LAGTDGDRS