PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc07148.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 220aa    MW: 24274.9 Da    PI: 5.605
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc07148.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.8e-193079255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  +ykGVr++k +grWvAeIr p++   r r++lg+++t+e+Aa+a +aa  +l+g
  Zmw_sc07148.1.g00010.1.sm.mk 30 RYKGVRRRK-WGRWVAEIRLPNS---RDRIWLGSYDTPEKAARAFDAAFVCLRG 79
                                  7*****998.**********933...5*********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.4E-273090IPR001471AP2/ERF domain
PROSITE profilePS5103222.7083089IPR001471AP2/ERF domain
PfamPF008474.1E-123078IPR001471AP2/ERF domain
CDDcd000182.60E-263091No hitNo description
SMARTSM003804.6E-303095IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-193090IPR016177DNA-binding domain
PRINTSPR003673.7E-93142IPR001471AP2/ERF domain
PRINTSPR003673.7E-95369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MPPPYDRILT SPQEQEHQHA RLPSSGDVRR YKGVRRRKWG RWVAEIRLPN SRDRIWLGSY  60
DTPEKAARAF DAAFVCLRGP GAADGLNFPS SPPAVARTSD VDEVYAVAVS YGNNHDTAMV  120
AREEAAVDPP PPRDSMLPAD NNVAAAAVPP RQLQVSTERL DCWSEFVNNP PPLYSPTWTG  180
SHEHLLPVPV TADVHTDETE SGAFLSLWSF DSSGGSCSWR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13137KGVRRRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004966651.12e-63ethylene-responsive transcription factor ERF017
TrEMBLK3Y3023e-62K3Y302_SETIT; Uncharacterized protein
STRINGSi008587m6e-63(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144