PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc07176.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 217aa    MW: 24036.6 Da    PI: 9.8932
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc07176.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.41.6e-09197217121
                                   ---SS-EEEEEEE--TT-SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                                   ldDgy+WrKYGqK vk+s +p
  Zmw_sc07176.1.g00020.1.am.mk 197 LDDGYKWRKYGQKIVKNSLHP 217
                                   59***************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-11182217IPR003657WRKY domain
SuperFamilySSF1182901.57E-8189217IPR003657WRKY domain
PROSITE profilePS5081112.564192217IPR003657WRKY domain
PfamPF031065.2E-6198217IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MERSSQLETC LPSLYGLSPC APPHRRLAPL PNDNKLLQMP LVHEQAGNHG VMLNSSDNDG  60
GLYPLLLPGI PFCPSSSASC DKPTGFAPLD AVEVNDDAPQ GVMLWRAPRQ RKPAAKSLVI  120
SRSQVATARV HGMPAARVQF LARWGLSVTD WAYTCGDGEN RWKGPATAAD KGRTMKVRRK  180
MREPRFCFQT RSDVDVLDDG YKWRKYGQKI VKNSLHP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825009.13e-58probable WRKY transcription factor 12
TrEMBLA0A2T7CY441e-58A0A2T7CY44_9POAL; Uncharacterized protein
TrEMBLA0A2T7CYF51e-58A0A2T7CYF5_9POAL; Uncharacterized protein
STRINGPavir.Gb01200.1.p1e-60(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP113838130