PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc07459.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 656aa MW: 73381.1 Da PI: 10.6741

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc07459.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.8	1.8e-52	364	491	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrFhPtdeelvv+yL++kv++++l++ +i+evd+yk++PwdLp+k+ ++kewyfF++rd+ky++g+r+nra+ +g Zmw_sc07459.1.g00020.1.am.mk 364 LPPGFRFHPTDEELVVHYLCRKVARQQLPV-PIIAEVDLYKFDPWDLPEKALFGHKEWYFFTPRDRKYPNGSRPNRAAGRG 443 79**************************.88***********8888899********************** PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 yWkatg dk++ k + ++ g+kk Lvfy+g+ap+g+ktdW+mheyr+ Zmw_sc07459.1.g00020.1.am.mk 444 YWKATGADKPIAPKgSAKAAGIKKALVFYSGKAPRGVKTDWIMHEYRV 491 ********99666779************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-61	360	517	IPR003441	NAC domain
PROSITE profile	PS51005	60.665	364	517	IPR003441	NAC domain
Pfam	PF02365	1.2E-26	365	491	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence Send to blast
MSFSDLQARG RSLQTTRKTD TRVGVSAVGT AGHPTWCDDS VRPRTGINET GWVRPAPRTH 60 GRGDAFVLEE QIIRWLVAGV RACVTPSFLL QIISLPWIRL PLDSRYDPSI VRRFHSQFHA 120 IGHSPPPAEP ERHPAVDGSG LTTNPARRIC LPRTVAARPG STHAPRGWGR QAGTGHVLNG 180 KHFFFTGKRR WTNLGLDSDA RATIRTWCQP KPSLEPQAGS PARRAESENI EFSRRPRAVP 240 FVEIAEPFDP TPRRRAPQVR PISTREPSRQ RRPCSSAAHA ARADRGAQAA RAHINGADPA 300 SLAAKETALY HPAAVRNQTN RTRGRRGVLT GRGRGRFRSR VVLRRMAMAA QASGRRDVEA 360 ELNLPPGFRF HPTDEELVVH YLCRKVARQQ LPVPIIAEVD LYKFDPWDLP EKALFGHKEW 420 YFFTPRDRKY PNGSRPNRAA GRGYWKATGA DKPIAPKGSA KAAGIKKALV FYSGKAPRGV 480 KTDWIMHEYR VADIDRAPGK KGSQKLDEWV LCRLYNKKNN WEKLKVEELQ DQMAAAHHRH 540 KEESMDVLAD TMSDSFQTHD SDIDNASGMQ QNSFGDMAQG QTTMPNGMVT VKEDSDWFTD 600 VNFDELQASY MNIGQMVNPN LGQMVNPAAG QECHAGYLQS IGAPQMRMWQ TILPPF

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence Send to blast

MSFSDLQARG RSLQTTRKTD TRVGVSAVGT AGHPTWCDDS VRPRTGINET GWVRPAPRTH  60
GRGDAFVLEE QIIRWLVAGV RACVTPSFLL QIISLPWIRL PLDSRYDPSI VRRFHSQFHA  120
IGHSPPPAEP ERHPAVDGSG LTTNPARRIC LPRTVAARPG STHAPRGWGR QAGTGHVLNG  180
KHFFFTGKRR WTNLGLDSDA RATIRTWCQP KPSLEPQAGS PARRAESENI EFSRRPRAVP  240
FVEIAEPFDP TPRRRAPQVR PISTREPSRQ RRPCSSAAHA ARADRGAQAA RAHINGADPA  300
SLAAKETALY HPAAVRNQTN RTRGRRGVLT GRGRGRFRSR VVLRRMAMAA QASGRRDVEA  360
ELNLPPGFRF HPTDEELVVH YLCRKVARQQ LPVPIIAEVD LYKFDPWDLP EKALFGHKEW  420
YFFTPRDRKY PNGSRPNRAA GRGYWKATGA DKPIAPKGSA KAAGIKKALV FYSGKAPRGV  480
KTDWIMHEYR VADIDRAPGK KGSQKLDEWV LCRLYNKKNN WEKLKVEELQ DQMAAAHHRH  540
KEESMDVLAD TMSDSFQTHD SDIDNASGMQ QNSFGDMAQG QTTMPNGMVT VKEDSDWFTD  600
VNFDELQASY MNIGQMVNPN LGQMVNPAAG QECHAGYLQS IGAPQMRMWQ TILPPF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	6e-90	356	523	7	174	Stress-induced transcription factor NAC1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5389	37	61