PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc07574.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 234aa    MW: 24112.1 Da    PI: 4.4052
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc07574.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.48.1e-091242448
                                  HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                                  W++Ia +++ gRt++++k++w+++l
  Zmw_sc07574.1.g00020.1.am.mk  1 WSSIATKLP-GRTDNEIKNYWNTHL 24
                                  *********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd001676.17E-7124No hitNo description
Gene3DG3DSA:1.10.10.602.2E-12125IPR009057Homeodomain-like
PfamPF002491.4E-6124IPR001005SANT/Myb domain
PROSITE profilePS5129417.774128IPR017930Myb domain
SuperFamilySSF466893.75E-7132IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
WSSIATKLPG RTDNEIKNYW NTHLRKKLLN MGIDPVTHRP RTDLDLLAGL PNSNLLAAAS  60
NTTWDINALK LQADAAKFQL LQGLISAIAA AAAPSVDLMA LLAASSAGLT QTVSVDRGSS  120
RSSQYDGFMN LPALTTAPTV SPGMTSFVGL LNGFIGGSAH AGDGLSSTDL GQSGASGSSM  180
TAAMAPPLVA AVACNAGAGV ATPCEETPAS SPFEELENLN LDDLSNDSWK DLLE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025811879.11e-102transcription factor MYB93-like
TrEMBLA0A1E5W8511e-107A0A1E5W851_9POAL; Transcription factor MYB39
STRINGSi006790m2e-91(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55293158