PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc08180.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 90aa MW: 10203 Da PI: 11.8706

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc08180.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	49.6	7.6e-16	15	60	7	52
RWP-RK 7 ledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + l +F+l i+dAA eLg+c++ LKri R +G++ WP R +++l Zmw_sc08180.1.g00010.1.am.mk 15 RKRLGTHFHLRIEDAAAELGICQSSLKRIRRSHGVPCWPGRMLSKL 60 678999***********************************99986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	11.627	1	80	IPR003035	RWP-RK domain
Pfam	PF02042	8.1E-16	16	60	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 90 aa Download sequence Send to blast
MEVLMAAAAR GRTERKRLGT HFHLRIEDAA AELGICQSSL KRIRRSHGVP CWPGRMLSKL 60 EMEAMGRQRE QHQGKKVGIV VRKWSPRASA

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8055	29	44