PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc09952.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 71aa    MW: 8340.35 Da    PI: 10.0588
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc09952.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.73e-105271221
                                  --SS-EEEEEEE--TT-SS- CS
                          WRKY  2 dDgynWrKYGqKevkgsefp 21
                                  +Dgy+WrKYGqK+++g+++p
  Zmw_sc09952.1.g00010.1.sm.mk 52 HDGYEWRKYGQKMIRGNTYP 71
                                  7****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.2E-93671IPR003657WRKY domain
SuperFamilySSF1182902.62E-84571IPR003657WRKY domain
PROSITE profilePS5081110.6135371IPR003657WRKY domain
PfamPF031062.4E-65371IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    Send to blast
MAKRDDYKTS SSGCSNGTHK RLLQDISGYA QEHAKKKVRV STRMEYTYAP YHDGYEWRKY  60
GQKMIRGNTY P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002456546.15e-37probable WRKY transcription factor 32
RefseqXP_021311159.15e-37probable WRKY transcription factor 32
RefseqXP_021311160.15e-37probable WRKY transcription factor 32
RefseqXP_021311161.15e-37probable WRKY transcription factor 32
RefseqXP_021311162.15e-37probable WRKY transcription factor 32
TrEMBLC5XN991e-35C5XN99_SORBI; Uncharacterized protein
STRINGSb03g038170.12e-36(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118143139