PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc10309.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 323aa MW: 34431.8 Da PI: 10.6248

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc10309.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.4	2.8e-37	4	61	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 e+ l+cprC s++tkfCy+nny+++qPr+fC+aC+ryWt+GGalrnvPvG+grrkn++ Zmw_sc10309.1.g00010.1.am.mk 4 EARLPCPRCRSRDTKFCYFNNYNVNQPRHFCRACHRYWTAGGALRNVPVGSGRRKNRA 61 56789***************************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.1E-30	6	60	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-26	7	60	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.64	7	61	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	9	45	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence Send to blast
AAAEARLPCP RCRSRDTKFC YFNNYNVNQP RHFCRACHRY WTAGGALRNV PVGSGRRKNR 60 AMLPSSAHVA TATASDDQGS GSSGSTPMFS TAPAGFFALY HDASSHITVP PAAYNAAGVT 120 ETTELWRWHV TSTAERSVTL DRAHGPGECR CFVLRLDVSQ EVGRVVATMM LGHMAANGRK 180 GASKFEDSSS DSSMPRPRYS TAPQAASEVP QRPAPRLKAA AGSESTGGAP RRPVVVRGTT 240 APRSPLHEAR MEKKPPVGGG GAGAGSRVVE LEAKLEKAHG QLTEMREQLT AAEKARKEAR 300 AALVEAKKRL AAKKRDDLGA AAS

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6495	28	51