PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc10547.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 174aa MW: 18789.6 Da PI: 8.9838

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc10547.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	30.8	5.9e-10	154	174	1	21
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK+vk+s +p Zmw_sc10547.1.g00010.1.sm.mk 154 LDDGYKWRKYGQKVVKNSLHP 174 59***************9887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.1E-11	139	174	IPR003657	WRKY domain
SuperFamily	SSF118290	1.16E-8	146	174	IPR003657	WRKY domain
PROSITE profile	PS50811	12.656	149	174	IPR003657	WRKY domain
Pfam	PF03106	3.6E-6	155	174	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence Send to blast
MQAYMEGGQL GTCLPASLVL LDSYTFSFPS PPLQLPTLPK RLLQMPFDQG EAGNHGAMLA 60 SDQGGLHQLP ALPFGCSGAA AVLSGGKPTA GLMPSVEEVC TSVTKVGYEG ATCNGSSTWW 120 KSSATMADRG KMKVRRKMRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025793222.1	6e-76	probable WRKY transcription factor 12
TrEMBL	A0A0A9DKW3	4e-84	A0A0A9DKW3_ARUDO; Uncharacterized protein
STRING	Pavir.Ab02456.1.p	9e-77	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1138	38	130