PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc12562.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 188aa MW: 21089.6 Da PI: 8.9546

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc12562.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	43.8	8.3e-14	2	132	14	128
NAM 14 lvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat...gkrknra 77 l+++yL+kk++g + l+ + +++ d++++ P+ L + + +++ ++ yfF+k++ ++ +r+ + Zmw_sc12562.1.g00010.1.am.mk 2 LINHYLRKKIDGAEvfsnLTNAAYFHDEDVCSARPEVLVRahtmparvpsREAGDGQQFYFFTKARFIGNKlnmRSRTIKN 82 89**********8865444356**********7446777766543223555778888877555441013344443 PP NAM 78 tk.sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128 t + +W+a g++k+v ++ + L ++ ++ pk ek W+m ey++ Zmw_sc12562.1.g00010.1.am.mk 83 TGdKETWHAEGRTKPVDG---TADAYITKLSYHVKTGPKtVEKPGWIMTEYTM 132 334778******77...34455667889965555415799*****87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	13.835	1	151	IPR003441	NAC domain
Pfam	PF02365	1.6E-8	2	131	IPR003441	NAC domain
SuperFamily	SSF101941	2.75E-15	2	137	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence Send to blast
LLINHYLRKK IDGAEVFSNL TNAAYFHDED VCSARPEVLV RAHTMPARVP SREAGDGQQF 60 YFFTKARFIG NKLNMRSRTI KNTGDKETWH AEGRTKPVDG TADAYITKLS YHVKTGPKTV 120 EKPGWIMTEY TMSDGKRKAA DDLGEATPST RPRQIDEDRQ HAAVLEFGAE RSQLTQDMPA 180 NSNSNSAL

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45