PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc12879.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 187aa MW: 19516.9 Da PI: 8.9236

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc12879.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	36.8	1.4e-11	7	69	82	144
DUF822 82 agssasaspesslq.sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvls 144 + +sa +sp+ss+q +s+ ss++aspv+sy+asp+sssfpsp++lds+++a ++ +lp+l+ l+ Zmw_sc12879.1.g00010.1.am.mk 7 GAASAGMSPCSSSQlLSAPSSSFASPVPSYHASPASSSFPSPTRLDSNNNA-PSLMLPFLRGLP 69 567899******9*******************************987.688888887665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.5E-8	2	56	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence Send to blast
GCKPPPGAAS AGMSPCSSSQ LLSAPSSSFA SPVPSYHASP ASSSFPSPTR LDSNNNAPSL 60 MLPFLRGLPT LPPLRVSNSA PVTPPLSSPT AAVSRPPTKV RRLDWDAVAV VDPFRHPFFA 120 VSAPASPTRA RRREHPDTIP ECDESDVSTV DSGRWISFQM APTTAPASPA YNLVNRGGGS 180 TSNPMEL

Functional Description ? help Back to Top
Source	Description
UniProt	Positive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid biosynthetic genes. May act as transcriptional repressor by binding the brassinosteroid-response element (5'-CGTGCG-3') in the promoter of GRAS32 (AC Q9LWU9), another positive regulator of brassinosteroid signaling (By similarity). {ECO:0000250}.
UniProt	Positive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid (BR) biosynthetic genes (PubMed:17699623, PubMed:19220793). May act as transcriptional repressor by binding the brassinosteroid-response element (BREE) (5'-CGTG(T/C)G-3') in the promoter of DLT (AC Q9LWU9), another positive regulator of BR signaling (PubMed:19220793). Acts as transcriptional repressor of LIC, a negative regulator of BR signaling, by binding to the BRRE element of its promoter. BZR1 and LIC play opposite roles in BR signaling and regulation of leaf bending (PubMed:22570626). {ECO:0000269\|PubMed:17699623, ECO:0000269\|PubMed:19220793, ECO:0000269\|PubMed:22570626}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Down-regulated by 24-epibrassinolide. {ECO:0000269\|PubMed:22570626}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004958130.1	2e-74	protein BZR1 homolog 1
Swissprot	B8B7S5	2e-72	BZR1_ORYSI; Protein BZR1 homolog 1
Swissprot	Q7XI96	2e-72	BZR1_ORYSJ; Protein BZR1 homolog 1
TrEMBL	A0A1E5UX51	4e-73	A0A1E5UX51_9POAL; Protein BZR1-like protein 1
STRING	Si030508m	8e-74	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5474	34	53

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Tong H, et al. DWARF AND LOW-TILLERING acts as a direct downstream target of a GSK3/SHAGGY-like kinase to mediate brassinosteroid responses in rice. Plant Cell, 2012. 24(6): p. 2562-77 [PMID:22685166]