PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc13655.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 179aa MW: 20220.5 Da PI: 5.1674

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc13655.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	62.2	1.6e-19	31	151	7	128
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk..a 85 F+Pt++elv ++L+++++g + +++ ++ e+d +++ PwdL +++ +++ +fF+ r ++ + +r++ g W a Zmw_sc13655.1.g00010.1.am.mk 31 FDPTEDELVLHFLRPQLRGFPPRVAGAVVEADPCSAAPWDLLARYGL-RDQGHFFAARGRSRP---SVRRSVGGGAWMrsA 107 9*********************999**********855544.5678**99987...689999*8557 PP NAM 86 tgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 t + ++v + + + + + + fy g+ k ++t Wvm+ey++ Zmw_sc13655.1.g00010.1.am.mk 108 TKSGRSVSDLGLVVRWRRAKFCFYmIGEVGKQRSTGWVMEEYEV 151 7778899888888999999*6578888899******86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	26.672	25	177	IPR003441	NAC domain
Pfam	PF02365	2.6E-12	31	151	IPR003441	NAC domain
SuperFamily	SSF101941	4.18E-29	31	176	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence Send to blast
MADEANLSAE EKEEEEHDGD AADLSSSADV FDPTEDELVL HFLRPQLRGF PPRVAGAVVE 60 ADPCSAAPWD LLARYGLRDQ GHFFAARGRS RPSVRRSVGG GAWMRSATKS GRSVSDLGLV 120 VRWRRAKFCF YMIGEVGKQR STGWVMEEYE VTDPQCYRRD DEGEEDGYWV LCRVRKSRK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025816116.1	4e-82	NAC domain-containing protein 18-like
TrEMBL	A0A0A9C0L5	1e-95	A0A0A9C0L5_ARUDO; Uncharacterized protein
STRING	Sb03g045610.1	3e-74	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13761	25	28