PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc14208.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

C2H2

Protein Properties

Length: 103aa MW: 10905.3 Da PI: 7.5124

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc14208.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	82	102	1	21
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 + C++C + F ++ L H++ Zmw_sc14208.1.g00010.1.am.mk 82 FACHYCRRQFYSSQALGGHQN 102 78***********99988886 PP

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence Send to blast
VGKEGRREKR LIGGGNGHRG QLDAAKVELD LLGGMVGSVV DFRPAAVRDV ADQSSSLPVL 60 LDLVPPDQPP STAAGLDPPQ LFACHYCRRQ FYSSQALGGH QNA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025799127.1	2e-16	uncharacterized protein LOC112879022
TrEMBL	A0A1D6H2L8	9e-22	A0A1D6H2L8_MAIZE; Zinc finger protein 2

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP183	36	274