PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma105g00560.1
Common NameZOSMA_105G00560
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family FAR1
Protein Properties Length: 64aa    MW: 7012.89 Da    PI: 10.2921
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma105g00560.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.41.3e-091151143
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43
                      +fY +YA ++ Fsvrks++ ++ ++  it+rt+vCs+egk++ 
  Zosma105g00560.1 11 NFYYRYAGHIVFSVRKSTTFSN-TD-GITRRTLVCSQEGKSNA 51
                      6***************987776.55.5************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.4E-61153IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 64 aa     Download sequence    Send to blast
MSFNTLVDAE NFYYRYAGHI VFSVRKSTTF SNTDGITRRT LVCSQEGKSN AIIPSATSSS  60
KKK*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9Q4M32e-38A0A0K9Q4M3_ZOSMR; Uncharacterized protein