PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma160g00330.1
Common NameZOSMA_160G00330
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family B3
Protein Properties Length: 814aa    MW: 94778.2 Da    PI: 10.2692
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma160g00330.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.34.8e-121192487
                      E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS...-EEEEEE...EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3  4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesg...rsWevkliy.rkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87
                      vl   d++++  l+lp k +  +gg k e  +++l +  g   ++W v ++  +k sg  y+ ++GW++Fvk+++L+ g f+vF ++ +
  Zosma160g00330.1 11 VL--LDNFTEE-LRLPIKVT--IGGRKWE--KMKLVSALGgekKVWYVDVKKdDKDSGVlYLTGDGWSSFVKDHDLRFGYFLVFNYSAQ 92
                      44..4555554.66666654..5666655..455555444456*******88445554477778*********************9764 PP

2B353.73.8e-17180273192
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                       f+ ++t s+v +   +vlp +f +++++++ +  + +l++++grsW+vk+++    ++k++  +++ GW+ F ++n+LkegD+ vF+l ++s+
  Zosma160g00330.1 180 FKITMTYSYVRRATGMVLPARFRDANNLSSVN--EAILTTTNGRSWTVKICHrrirDGKKKNSYFSVGWSIFLRENNLKEGDVYVFELLSKSR 270
                       67789999******************888555..8***************99777766666689999********************987666 PP

                       E.. CS
                B3  90 fel 92 
                        + 
  Zosma160g00330.1 271 DRV 273
                       544 PP

3B331.62.9e-10317412399
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                        ++++ ++ +++++ +p  f ++++ ++ +  + +l+ ++g sW++k +y++ +++   +l+ G + F ++n+LkegD+ vF + +  +f+  
  Zosma160g00330.1 317 EITMTDSYIRRSLMHFPAGFGDANNFSTVN--EAILTATNGCSWTLKNCYSRIGNKinNYLSVGRSVFLRENNLKEGDVYVFDRAN-FSFTKQ 406
                       4566888888899***********777555..79****************6666666699**********************9543.677777 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       + +frk
  Zosma160g00330.1 407 LEFFRK 412
                       777766 PP

4B343.94.3e-14446541296
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                       f ++++ ++ ++ ++ +p +f +++++++ +  + +l+ ++gr+W vk+ +r+  ++     +++GW  Fv++n+LkegD+ vF+l++r+e +
  Zosma160g00330.1 446 FEITMTGSYIQRPIMHFPAEFRNANNLSSVN--EAILTATNGRRWMVKIHHRRLANKiiiSSFSAGWPVFVRENNLKEGDVYVFELSSRNENQ 536
                       5566677777778899*****9999888555..79**************999999995555666**********************9987776 PP

                       .EEEE CS
                B3  92 lvvkv 96 
                        v++v
  Zosma160g00330.1 537 AVFSV 541
                       77766 PP

5B340.26.1e-13585674696
                       ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       ++s + k+ ++ +p  f ++++++  +  ++tl + +g  W+vkl++  k+++    ++++GW  Fv++n+LkegD+ vF+l++r+e + v++
  Zosma160g00330.1 585 MTSTYIKR-LMHFPVAFRNKNNLSAVN--EVTLVNANG-CWKVKLCHIPKGNQiltSFFSAGWPVFVRENNLKEGDVYVFELSSRNENQAVFS 673
                       45666665.5999****9999888666..799999777.5*****998888887778899**********************99877767776 PP

                       E CS
                B3  96 v 96 
                       v
  Zosma160g00330.1 674 V 674
                       6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010191.4E-58103IPR003340B3 DNA binding domain
CDDcd100172.82E-7890No hitNo description
SuperFamilySSF1019361.12E-118109IPR015300DNA-binding pseudobarrel domain
PfamPF023623.3E-91191IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.2E-1012100IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508638.9847103IPR003340B3 DNA binding domain
SuperFamilySSF1019369.61E-18177273IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.109.7E-18177274IPR015300DNA-binding pseudobarrel domain
CDDcd100176.06E-14178265No hitNo description
PfamPF023623.1E-14180271IPR003340B3 DNA binding domain
SMARTSM010192.0E-13180279IPR003340B3 DNA binding domain
PROSITE profilePS5086313.972180281IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.6E-10312400IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.79E-10313409IPR015300DNA-binding pseudobarrel domain
CDDcd100171.11E-7314404No hitNo description
PROSITE profilePS508639.347315413IPR003340B3 DNA binding domain
SMARTSM010190.0085316413IPR003340B3 DNA binding domain
PfamPF023623.3E-8317412IPR003340B3 DNA binding domain
SuperFamilySSF1019361.61E-14442533IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.4E-16442541IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.633445545IPR003340B3 DNA binding domain
SMARTSM010199.4E-5446545IPR003340B3 DNA binding domain
CDDcd100174.15E-10446533No hitNo description
PfamPF023622.8E-11447541IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.8E-15577674IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.02E-13577665IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.011579678IPR003340B3 DNA binding domain
CDDcd100174.50E-11579666No hitNo description
SMARTSM010192.0E-10581678IPR003340B3 DNA binding domain
PfamPF023628.2E-11584674IPR003340B3 DNA binding domain
SuperFamilySSF1019363.92E-7711796IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.9E-8711800IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508636.16712810IPR003340B3 DNA binding domain
SMARTSM010190.0037714808IPR003340B3 DNA binding domain
PfamPF023626.2E-8715802IPR003340B3 DNA binding domain
CDDcd100175.02E-8721807No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 814 aa     Download sequence    Send to blast
MVDFTGNFFR VLLDNFTEEL RLPIKVTIGG RKWEKMKLVS ALGGEKKVWY VDVKKDDKDS  60
GVLYLTGDGW SSFVKDHDLR FGYFLVFNYS AQMNYKVIPY DLSTFEKPYQ QSVHDDTHQC  120
LKRKWKSSQE ATDDNRLKKK KKAVIFPPRF PANSEKNEEE NNIEKMKNVG GNFGVSKPRF  180
KITMTYSYVR RATGMVLPAR FRDANNLSSV NEAILTTTNG RSWTVKICHR RIRDGKKKNS  240
YFSVGWSIFL RENNLKEGDV YVFELLSKSR DRVDFSVTKK LEFSRKTVPG RTQSPRMTND  300
GNRAYFDVKM VEKPQFEITM TDSYIRRSLM HFPAGFGDAN NFSTVNEAIL TATNGCSWTL  360
KNCYSRIGNK INNYLSVGRS VFLRENNLKE GDVYVFDRAN FSFTKQLEFF RKTAPRRTYS  420
PRMTNGFSMD GNESYFDVKM ADKPWFEITM TGSYIQRPIM HFPAEFRNAN NLSSVNEAIL  480
TATNGRRWMV KIHHRRLANK IIISSFSAGW PVFVRENNLK EGDVYVFELS SRNENQAVFS  540
VTKQLEFSRK VVPRRMHSPR MTNSRGFSTD ENRAMVEKPQ FEIKMTSTYI KRLMHFPVAF  600
RNKNNLSAVN EVTLVNANGC WKVKLCHIPK GNQILTSFFS AGWPVFVREN NLKEGDVYVF  660
ELSSRNENQA VFSVTKQLEF FRKAVPRRMH SPRMTNRRRF STDENRAMVE KPQFKISIAP  720
YIHMNFMYFP SRFCDANNLS SIDQAILTYN NVNWPVKICH TPQRDRYIFS TLSTGWISFV  780
RENNLEVDIY NFELSSTDET RAYFIVTKEV DLC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121141KRKWKSSQEATDDNRLKKKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PWQ80.0A0A0K9PWQ8_ZOSMR; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24680.16e-13B3 family protein