PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma17g00890.1
Common NameZOSMA_17G00890
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 247aa    MW: 27803.5 Da    PI: 10.2156
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma17g00890.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35.3e-11127187363
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      ++kr +r   NR +A+rsR +K+++i +Le  + +L+ e ++L   ++ l+ + + l++++
  Zosma17g00890.1 127 DSKRIKRILANRQSAQRSRVKKLQYIMQLEHSMTSLQMEVSTLSPCVSYLNHQRSVLTMDN 187
                      68*****************************************999999998888888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.2E-10125189IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.829127190IPR004827Basic-leucine zipper domain
PfamPF001703.4E-9128186IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-12129183No hitNo description
SuperFamilySSF579591.13E-10129183No hitNo description
CDDcd147031.06E-18130180No hitNo description
PROSITE patternPS000360132147IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MAQLPPKIPI TATISRSSSR GVHRNSPSLS FLPCAAVDDN SCSVDDFLNF TTLKRDSHRR  60
SISDSVAVVS PKQQFLSIFN DAGSSDTNHG LVHQLENTAA LERNKDDDLK KIRKTPAVAG  120
ASDQIQDSKR IKRILANRQS AQRSRVKKLQ YIMQLEHSMT SLQMEVSTLS PCVSYLNHQR  180
SVLTMDNSAL RQRIVALSQD KIFKDAHQES LKKEVERLRK VYNDKQRTKN TTEYQADQIQ  240
PPFLPD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002275912.12e-59PREDICTED: basic leucine zipper 61
TrEMBLA0A0K9PRE11e-180A0A0K9PRE1_ZOSMR; BZIP transcription factor family protein
STRINGVIT_12s0028g02590.t017e-59(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.22e-54bZIP family protein