PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zosma208g00360.1

Common Name

ZOSMA_208G00360

Organism

Zostera marina

Taxonomic ID

29655

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera

Family

BES1

Protein Properties

Length: 159aa MW: 18166.6 Da PI: 10.0831

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zosma208g00360.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	117.9	1.5e-36	36	139	3	105
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssas.aspess 93 s r+p+ +ErE+n++RE+rRR ++aki+a L+++Gny+lpk+aD+n+Vl ALc eAGw v++DG rk +k + + + + ++ + s+ Zosma208g00360.1 36 SLRRPSDQEREKNRLREKRRRMVTAKIFACLKKHGNYNLPKHADQNDVLFALCDEAGWHVDQDGVISRKEKKVDnDGSTIPATITTnCHRYSQ 128 679*****************************************************************9999884333333333331344444 PP DUF822 94 lqsslkssalas 105 l l++ ++++ Zosma208g00360.1 129 LP-FLQNISTTT 139 44.444443333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.1E-31	38	136	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence Send to blast
MEEERTTTPT MRGCIKATRN PWKVKHKGRD GSIRMSLRRP SDQEREKNRL REKRRRMVTA 60 KIFACLKKHG NYNLPKHADQ NDVLFALCDE AGWHVDQDGV ISRKEKKVDN DGSTIPATIT 120 TNCHRYSQLP FLQNISTTTT EEESSAHGLD LTLTLGRF*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	4e-12	38	104	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	4e-12	38	104	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	4e-12	38	104	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	4e-12	38	104	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0K9PL09	1e-115	A0A0K9PL09_ZOSMR; Uncharacterized protein
STRING	XP_009795965.1	1e-36	(Nicotiana sylvestris)
STRING	XP_009609992.1	9e-37	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13201	30	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36780.1	1e-15	BES1/BZR1 homolog 2

Link Out ? help Back to Top
Phytozome	Zosma208g00360.1