PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma209g00070.1
Common NameZOSMA_209G00070
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family ERF
Protein Properties Length: 279aa    MW: 30664.5 Da    PI: 5.0916
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma209g00070.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.81.7e-1595143355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        +GVr+++ +g+W+AeIrdp    +r  r +lg+++t+eeA  a+  a+k le 
  Zosma209g00070.1  95 RRGVRRRS-WGKWAAEIRDP----IRgIRRWLGTYDTEEEASIAYQTAAKILEA 143
                       59***887.**********7....246999********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.26894151IPR001471AP2/ERF domain
SMARTSM003801.3E-1894157IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-1694141IPR016177DNA-binding domain
PRINTSPR003673.3E-795106IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-1996145IPR001471AP2/ERF domain
PfamPF008474.8E-896143IPR001471AP2/ERF domain
CDDcd000187.26E-16103138No hitNo description
PRINTSPR003673.3E-7117133IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MVSAAHPQRF RDIRTVRLIC DDPDGTDASS DDDEEATEWK MKKKQIVVEI RIPSLPLSPA  60
PPVSANSSSS SKPARKKSHT SSSSSSSSLK KSSSRRGVRR RSWGKWAAEI RDPIRGIRRW  120
LGTYDTEEEA SIAYQTAAKI LEAEKTSIAT TTCSTGSVCD DSDATQKQMT QLFSVSSHSS  180
VLDLIRTKQK PAAPFNVEES QSKVVVPIEE DVNFEVDLGG FLAVTDDQFG QMLLDEALGR  240
TMIDLPPPLG KLDYGRCDLL KESVDFDFNF DPVALMML*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PL520.0A0A0K9PL52_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.19e-14ethylene-responsive element binding protein