PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma20g01410.1
Common NameZOSMA_20G01410
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 200aa    MW: 23143.8 Da    PI: 5.6084
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma20g01410.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.31.4e-1275122350
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                      ++++ r+   N+eA r++R++Kka++++Le++vkeL + N+ Lkk+l+
  Zosma20g01410.1  75 RSRKHRKTLGNKEAVRKYREKKKAYTDNLEDEVKELRKTNMWLKKKLQ 122
                      568899***************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-1268139No hitNo description
SMARTSM003381.8E-1070140IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.09475122IPR004827Basic-leucine zipper domain
PfamPF077168.1E-1177122IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-977123No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MEDGGDDLST QFLLSNSEIE ELLRSTCTHT HTCNSSSRDD NTTGHTHTCY HTHTRVIKPA  60
EEEDEEEQEE EEEGRSRKHR KTLGNKEAVR KYREKKKAYT DNLEDEVKEL RKTNMWLKKK  120
LQGQVVLQAE VLRLRSLLDH FRGEIEGELG RYPFVKSQYN DPLLMINGLE KNQCLPAMAS  180
CEMDENCNLV PFNYHVTRG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027354369.15e-44basic leucine zipper 23-like isoform X1
RefseqXP_027354370.15e-44basic leucine zipper 23-like isoform X2
RefseqXP_027354371.15e-44basic leucine zipper 23-like isoform X3
RefseqXP_027354372.15e-44basic leucine zipper 23-like isoform X1
RefseqXP_027354373.15e-44basic leucine zipper 23-like isoform X1
TrEMBLA0A0K9PN781e-146A0A0K9PN78_ZOSMR; Basic-leucine zipper (BZIP) transcription factor family
STRINGXP_006486739.12e-42(Citrus sinensis)
STRINGGorai.012G081200.11e-42(Gossypium raimondii)
STRINGPOPTR_0004s18120.12e-42(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP41753572
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.13e-23bZIP family protein