PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zosma212g00100.1

Common Name

ZOSMA_212G00100

Organism

Zostera marina

Taxonomic ID

29655

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera

Family

Dof

Protein Properties

Length: 215aa MW: 23409.7 Da PI: 7.863

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zosma212g00100.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.3	3.3e-38	20	79	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + l+cprC+s+ntkfCyynny+lsqPr+fCkaCrryWtkGG lrnvPvGgg+r+n k++ Zosma212g00100.1 20 QPRLRCPRCESMNTKFCYYNNYNLSQPRHFCKACRRYWTKGGVLRNVPVGGGTRRNSKRH 79 56789**************************************************99876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-23	9	74	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.0E-32	22	77	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.068	23	77	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	25	61	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence Send to blast
MQNPAIFPAM KEYPPEQNQQ PRLRCPRCES MNTKFCYYNN YNLSQPRHFC KACRRYWTKG 60 GVLRNVPVGG GTRRNSKRHS DTTSSSSNDK NTNNETGVIN PHPPKKAAIQ IPDSELVYSG 120 IGHLGPQINI GGSGGFSSLL EENGHYGSLL DSFHHVRVGN ENNNESNCLA STPPENLNFW 180 SNGSGSGGGG DDPNGHGAGG EWPDLSIYTP RSDF*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0K9PMN2	1e-157	A0A0K9PMN2_ZOSMR; DOF zinc finger protein 1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	5e-33	DOF zinc finger protein 1

Link Out ? help Back to Top
Phytozome	Zosma212g00100.1