PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma27g01490.1
Common NameZOSMA_27G01490
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family FAR1
Protein Properties Length: 64aa    MW: 7033.91 Da    PI: 10.8895
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma27g01490.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.48.4e-121150142
             FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkre 42
                     +fY +YA ++GFsvrks+++++  ++ it+r +vCsk+gk++
  Zosma27g01490.1 11 NFYYRYAGRTGFSVRKSTTSSN--SQGITRRSLVCSKQGKSN 50
                     6***************987766..6669***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.2E-91150IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 64 aa     Download sequence    Send to blast
MSFKTLEDAE NFYYRYAGRT GFSVRKSTTS SNSQGITRRS LVCSKQGKSN AIIPTSSNSF  60
IKK*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PDP72e-37A0A0K9PDP7_ZOSMR; Uncharacterized protein