PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma31g01570.1
Common NameZOSMA_31G01570
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family Trihelix
Protein Properties Length: 101aa    MW: 11769.2 Da    PI: 9.2316
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma31g01570.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.34.1e-086701175
         trihelix 11 iearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75
                     +e+    ++r +++ ++ ++W  +++++ +  + r++  C+ kw++l  ++  ik++e++ + ++
  Zosma31g01570.1  6 LEINVVYDKRGSSTISAHQKWNIIGDHLIALNICRNSSHCRRKWDSLTSEHYTIKDWESRSRYQT 70
                     56666677888888899*****************************************9975444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MLTFVLEINV VYDKRGSSTI SAHQKWNIIG DHLIALNICR NSSHCRRKWD SLTSEHYTIK  60
DWESRSRYQT ASTSRSNGGN SYWCLESDKR KDLKLRIEFD *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PBJ13e-67A0A0K9PBJ1_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63532433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.12e-17sequence-specific DNA binding transcription factors