PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zosma323g00060.1

Common Name

ZOSMA_323G00060

Organism

Zostera marina

Taxonomic ID

29655

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera

Family

Dof

Protein Properties

Length: 259aa MW: 28124.2 Da PI: 9.4207

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zosma323g00060.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	112.9	1.4e-35	20	75	4	59
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 ++ +cprC+s++tkfCyynny+l+qPr+fCk+CrryWt GG++rn+PvGg++r+n Zosma323g00060.1 20 EHPRCPRCNSQETKFCYYNNYNLAQPRHFCKSCRRYWTLGGTIRNIPVGGTSRRNY 75 5678*************************************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	27.41	22	76	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.5E-30	22	74	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	24	60	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-20	24	73	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence Send to blast
MASGFITRRL TPTPPPSSSE HPRCPRCNSQ ETKFCYYNNY NLAQPRHFCK SCRRYWTLGG 60 TIRNIPVGGT SRRNYLTASA SSTSSYSSSG ISKRRKSDRP TSNNSSSTAS SSSKMVLVDV 120 HHHGVVHTSP QPISVVAPGN EEHFVPRTFG GLLTEPIPSG FRLGLGIEET GFSQGRTPWS 180 FFGEETFFNH VGVGVSIGRQ PPPPPQQQQT QHQMVGGGIG DYGSDLFFDA WPISGGYGGG 240 HFTWPDVTVD TTPAKKIE*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0K9PB13	0.0	A0A0K9PB13_ZOSMR; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21270.1	1e-26	DOF zinc finger protein 2

Link Out ? help Back to Top
Phytozome	Zosma323g00060.1