PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma330g00050.1
Common NameZOSMA_330G00050
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family ERF
Protein Properties Length: 198aa    MW: 21714.2 Da    PI: 7.9279
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma330g00050.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.31.5e-162267251
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                      +y+GVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa  
  Zosma330g00050.1 22 QYRGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALF 67
                      7*****998.**********9...336********************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.51E-142181No hitNo description
Gene3DG3DSA:3.30.730.107.4E-282181IPR001471AP2/ERF domain
SMARTSM003801.4E-302286IPR001471AP2/ERF domain
PROSITE profilePS5103220.6392280IPR001471AP2/ERF domain
PfamPF008478.7E-102265IPR001471AP2/ERF domain
SuperFamilySSF541715.36E-172280IPR016177DNA-binding domain
PRINTSPR003671.3E-92334IPR001471AP2/ERF domain
PRINTSPR003671.3E-94561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MKLNKNKKNT IVGRDCKRSS KQYRGVRMRS WGSWVSEIRA PNQKTRIWLG SYSTAEAAAR  60
AYDAALFIVK GSINANFNFP EILSSDLLNY HPSPNANMMS PKSIQRVAAA AAANTNPHST  120
ASLVASAIAT TSSSTSTSSS SSETSERNVL EDNSWAELGA FQTLKYDDDM LNAWTMCGYS  180
QLEDCEEDGD IRLWSFC*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008802060.11e-41ethylene-responsive transcription factor ERF014-like
SwissprotQ9SFE43e-35ERF12_ARATH; Ethylene-responsive transcription factor ERF012
TrEMBLA0A0K9P8A31e-144A0A0K9P8A3_ZOSMR; Uncharacterized protein
STRINGXP_008802060.15e-41(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108303040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.11e-27ERF family protein
Publications ? help Back to Top
  1. Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
    Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
    Plant Signal Behav, 2014. 9(3): p. e28211
    [PMID:24614501]
  2. Kazama D, et al.
    Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
    Plants (Basel), 2013. 2(4): p. 769-85
    [PMID:27137403]