PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma4g00810.1
Common NameZOSMA_4G00810
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family FAR1
Protein Properties Length: 78aa    MW: 8814 Da    PI: 8.4516
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma4g00810.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.76.8e-073365842
            FAR1  8 kevGFsvrkskskkskrngeitkrtfvCskegkre 42
                     ++GFsvrks+s+k    +e++ +++vCskeg++ 
  Zosma4g00810.1 33 GNLGFSVRKSTSRKI--ANEVVYKKYVCSKEGTSI 65
                    578********9998..677999*********865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.6E-43365IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    Send to blast
MIQTKRIFTS IFEIGKIFGT IDEAESEYYE QVGNLGFSVR KSTSRKIANE VVYKKYVCSK  60
EGTSIIHREE TLTDNGK*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9P0N18e-48A0A0K9P0N1_ZOSMR; Uncharacterized protein