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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma52g00880.1 |
| Common Name | ZOSMA_52G00880 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
GRAS |
| Protein Properties |
Length: 419aa MW: 47499.3 Da PI: 5.59 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma52g00880.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 265.9 | 1.4e-81 | 4 | 404 | 3 | 373 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdg..dpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalkl..fsevsPi 90
+lL+e +av+ gd++l+q++ + +++as d ++qRla f++AL r +r+++ + ++++t ++ +++l+ ++l f+ev+P+
Zosma52g00880.1 4 QLLVELGNAVEYGDANLVQKIRWVENKIASMDSnyHSNQRLAVAFLRALTIRAFRKSTDYDTTSEMTRTMISQlvDAHRLSLVQLasFVEVTPW 97
89**************************99998556*******************55554444444444433344455555556699******* PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg.....skeeleetgerLakfAeelgvpfef 178
+ f++ taN +I++av+g + vHi+D+ ++++Q p+L++aLa+Rpegpp +R+T+ +s+ ++ e+g rL +fA + ++ ++f
Zosma52g00880.1 98 HWFGYSTANATIVDAVAGFSVVHIVDLTTTHCMQIPTLIDALANRPEGPPlIIRLTVPILTTSKcppprVFVSYDEIGLRLVNFAMTHNIYLDF 191
**********************************************9999899***977766667888778899******************** PP
GRAS 179 nvlvakrledl.......eleeLrvkp.gEalaVnlvlqlhrlldesvsles..........erdevLklvkslsPkvvvvveqeadhnsesFl 254
++v++ +++ +++++++++ Eal+Vn+++ lh ++des+s+ r+ +L+ ++sl+P vv++v++++d s++F
Zosma52g00880.1 192 IPIVSDPSDAFdsliqhvRFHKMQISEaSEALVVNCQMLLHMIPDESASTVAgaiqsssfisLRTVFLNSLRSLNPLVVTLVDEDVDFVSGDFT 285
**96654443322243338888888889****************666655433333344444899***************************** PP
GRAS 255 erflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg 348
+r+ ++++y + fd+++++lp+ se ++++E+ + ++++nv+a+eg +r+er+e++++W er++++GF+ +p++e+aa++a+ ll +++ g
Zosma52g00880.1 286 RRLRSSFNYLWIPFDAVKMSLPEGSEMKQWYEND-VCWKVENVIANEGMQRVERQESKARWVERMTRVGFRRMPFGENAATKAQNLLDVHAFTG 378
**********************************.99********************************************************* PP
GRAS 349 yrveeesg.slvlgWkdrpLvsvSaW 373
+ +++e+g lvl+Wk++++v+++ W
Zosma52g00880.1 379 WGWKNEQGqDLVLTWKGHNVVFATTW 404
****76551688************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 419 aa
Download sequence Send
to blast |
MEEQLLVELG NAVEYGDANL VQKIRWVENK IASMDSNYHS NQRLAVAFLR ALTIRAFRKS 60
TDYDTTSEMT RTMISQLVDA HRLSLVQLAS FVEVTPWHWF GYSTANATIV DAVAGFSVVH 120
IVDLTTTHCM QIPTLIDALA NRPEGPPLII RLTVPILTTS KCPPPRVFVS YDEIGLRLVN 180
FAMTHNIYLD FIPIVSDPSD AFDSLIQHVR FHKMQISEAS EALVVNCQML LHMIPDESAS 240
TVAGAIQSSS FISLRTVFLN SLRSLNPLVV TLVDEDVDFV SGDFTRRLRS SFNYLWIPFD 300
AVKMSLPEGS EMKQWYENDV CWKVENVIAN EGMQRVERQE SKARWVERMT RVGFRRMPFG 360
ENAATKAQNL LDVHAFTGWG WKNEQGQDLV LTWKGHNVVF ATTWIPDLQY NYDLSSLI*
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