PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma52g01090.1
Common NameZOSMA_52G01090
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 142aa    MW: 16415.8 Da    PI: 10.1115
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma52g01090.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.72.5e-133180554
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54
                     +r rr+ +NRe+ArrsR RK++ +eeLe  v  Le eN++  k++ + ++
  Zosma52g01090.1 31 RRKRRMTSNRESARRSRMRKQKHVEELEGVVVRLELENREVVKRIGTANQ 80
                     699***********************************999998877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575126No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-102776No hitNo description
SMARTSM003381.5E-162791IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1622975IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-113179No hitNo description
PfamPF001709.2E-113179IPR004827Basic-leucine zipper domain
CDDcd147024.93E-143280No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MLMGYKPHCQ LERIFSSPSA TTGGSCSDGE RRKRRMTSNR ESARRSRMRK QKHVEELEGV  60
VVRLELENRE VVKRIGTANQ YSLLFNQENH RLRLEQLHLR QRLADVQGIL AFQQELHLDL  120
SMVCSGKDTM NLNGFEQTLF I*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13051RRKRRMTSNRESARRSRMRKQK
24350RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9NXP17e-99A0A0K9NXP1_ZOSMR; Ocs element-binding factor 1
STRINGXP_010273467.13e-21(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP17765510
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15830.12e-08basic leucine-zipper 3