PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma6g01400.1
Common NameZOSMA_6G01400
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family EIL
Protein Properties Length: 558aa    MW: 62154.9 Da    PI: 4.9865
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma6g01400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3368.11.5e-112363522321
                     XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 
                     el+ rmwkd +++kr+ker k  +  ++ +++++k++   +q+rrkkmsraQDgiLkYMlk mevcna+GfvYgiipekgkpv+g+sd+LraWWk
  Zosma6g01400.1  36 ELSMRMWKDHVRMKRIKERDKIMV--QQ-ELRNSKNRAYMDQSRRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPEKGKPVSGSSDNLRAWWK 127
                     999****************99855..33.378999************************************************************ PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT-- CS
            EIN3  97 ekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqg 191
                     e+v+fd+ gpaai ++++++l l +++++   + +   +l+ lqD+tlgSLLs+l qhcdppqr++pl++gv+pPWWP+G+e+ww  l   + q 
  Zosma6g01400.1 128 ENVKFDKSGPAAIDDHDSADLSLISAQQS---SGKHLDNLMSLQDATLGSLLSSLLQHCDPPQRKYPLNNGVSPPWWPSGTEDWWMDLDPLAGQI 219
                     ****************9999888866555...7999*****************************************************999999 PP

                     .-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXX.XXXXXXXXXXXXXXXX CS
            EIN3 192 tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrk.qspkvtlsceqkedve 285
                     +ppykkphdlkka kv+vLtavikhmsp+i++ir+l  +sk lqdkm+akes ++  +l++ee+ +++  +++s l+   s++ +++++  e+ +
  Zosma6g01400.1 220 PPPYKKPHDLKKASKVGVLTAVIKHMSPNIAKIRNLIHKSKLLQDKMTAKESSIWRTILKREESNLKQPITENSMLSPtVSQSNVCNKR--EETD 312
                     **********************************************************************9977554324444444444..4444 PP

                     ....XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3 286 ....gkkeskikhvqavkttagfpvvrkrkkkpsesakvs 321
                          +   ki++    k + ++    krk++ +  + v 
  Zosma6g01400.1 313 gagcCTTSDKIQTGMVTKDNGNVCWRPKRKRNLATLTHVT 352
                     4466333444443333333345556666665555444443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.4E-11336282No hitNo description
Gene3DG3DSA:1.10.3180.104.0E-61156288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167687.85E-54163284IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 558 aa     Download sequence    Send to blast
MIGGAIEEDM DIEVSNIQPA NLTENDVSDE EIDEQELSMR MWKDHVRMKR IKERDKIMVQ  60
QELRNSKNRA YMDQSRRKKM SRAQDGILKY MLKLMEVCNA RGFVYGIIPE KGKPVSGSSD  120
NLRAWWKENV KFDKSGPAAI DDHDSADLSL ISAQQSSGKH LDNLMSLQDA TLGSLLSSLL  180
QHCDPPQRKY PLNNGVSPPW WPSGTEDWWM DLDPLAGQIP PPYKKPHDLK KASKVGVLTA  240
VIKHMSPNIA KIRNLIHKSK LLQDKMTAKE SSIWRTILKR EESNLKQPIT ENSMLSPTVS  300
QSNVCNKREE TDGAGCCTTS DKIQTGMVTK DNGNVCWRPK RKRNLATLTH VTDTQELQGI  360
PVVNQSKLPQ YECVSSDSNS ESGIQFLLPD CGYDTTFPAS LIDHSAQSMC ITDSSLQPDI  420
RNLETNCGNS PAVFSHAPIV DNQLLNGNGG VARMVENRIV DRNNGVVQQI KNGNVEINTG  480
NQAVVGANTL DVNVHQSLPD SAFDNTQHKH VDGGLSNDDF SLNFDDIGEM PFDFGPLDFE  540
DLEEFLDGEE IMEYLGT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A4e-521632835125Protein ETHYLENE INSENSITIVE 3
4zds_B4e-521632835125Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008797493.11e-131ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_008797494.11e-131ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-114EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A0K9NRI90.0A0A0K9NRI9_ZOSMR; Uncharacterized protein
STRINGXP_008797493.11e-130(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-116ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]