PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma70g00410.1
Common NameZOSMA_70G00410
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family ERF
Protein Properties Length: 281aa    MW: 31072 Da    PI: 7.8409
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma70g00410.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.31.2e-1596143455
              AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      +GVr+++ +g+W+AeIrdp    +r  r +lg+++t++eAa a+ +a +kle 
  Zosma70g00410.1  96 RGVRRRS-WGKWAAEIRDP----IRgIRKWLGTYDTEDEAAIAYQQAFLKLEA 143
                      9***887.**********7....246**********99*********999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.04E-2193141No hitNo description
PROSITE profilePS5103219.4494151IPR001471AP2/ERF domain
SMARTSM003804.2E-1894157IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-1694142IPR016177DNA-binding domain
PRINTSPR003671.8E-795106IPR001471AP2/ERF domain
PfamPF008471.7E-996144IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-2096146IPR001471AP2/ERF domain
PRINTSPR003671.8E-7117133IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MQVSPHLPPF RVARIFCDDP DATDSSSDEE YSGKVRISGR ASVSRKKMMV KIRIPCNTLV  60
CPSNTSSIES SVPTKKKRFP KTTISRIMTK KSSNARGVRR RSWGKWAAEI RDPIRGIRKW  120
LGTYDTEDEA AIAYQQAFLK LEAEKKALSC ESGDRKQQRQ HEQQFSISSP SSVLEKEAEK  180
QLPSSPSSSP SPSLSPSASV SPTFPEGGAF PIDIDFGPAW DSQLGRMLND AWESMEDYPV  240
CGGLKEEDGS NNKNQPLDDL LLKSSSSMDF DLDPIALMNF *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9NSH70.0A0A0K9NSH7_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-18cytokinin response factor 4