PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma81g00360.1
Common NameZOSMA_81G00360
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family ERF
Protein Properties Length: 218aa    MW: 24491.2 Da    PI: 10.0371
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma81g00360.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.7e-162777155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     + ++GVr  ++ g+Wv+eIr+p +   ++r++lg++ t+e+Aa+a++ a+ +l+g
  Zosma81g00360.1 27 PVFHGVR-ERNGGKWVCEIREPLK---KARIWLGTYQTPEMAARAHDVAAIALRG 77
                     5799**9.7779*********743...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.3E-102777IPR001471AP2/ERF domain
SMARTSM003802.0E-262891IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-282886IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-202887IPR016177DNA-binding domain
PROSITE profilePS5103220.5742885IPR001471AP2/ERF domain
PRINTSPR003674.0E-72940IPR001471AP2/ERF domain
CDDcd000181.12E-272987No hitNo description
PRINTSPR003674.0E-75167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MILGDQHCFS ASKRKSGRKK FKETRHPVFH GVRERNGGKW VCEIREPLKK ARIWLGTYQT  60
PEMAARAHDV AAIALRGKYA MLNFKDSLLI LPRASSNSAV DIRSAATHAA AMFRPPLLNR  120
SRKKKIKKKT SDVVMTQSKS TPFPPPSTSA EPQPVQVESQ SDDLVGGGFV DEEEFFDMPG  180
MLRSMVEGLV VAPPQMKQEI EWEDEPWDLG FSLWTYM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010940400.12e-63dehydration-responsive element-binding protein 1F
TrEMBLA0A0K9NMI31e-161A0A0K9NMI3_ZOSMR; Dehydration responsive element binding transcription factor 1B
STRINGXP_008807523.11e-59(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.15e-47C-repeat/DRE binding factor 2