PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma8g00670.1
Common NameZOSMA_8G00670
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family GeBP
Protein Properties Length: 295aa    MW: 33573.2 Da    PI: 7.406
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma8g00670.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57341.73.1e-1344144496
          DUF573   4 qrlwseeDeivlLqGlidfkaktgk.....spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk..aksgkepsfskehdqkife 90 
                     +++w+ee  iv+L Gl++fka+++      +  + di + +   kksi  ++ +  l++K+r+L+ Kf    ++  +k+ k+ +     ++  ++
  Zosma8g00670.1  44 RKMWTEEESIVILNGLVEFKATHNEsrapcNLAEyDILRDHLLSKKSITGDFDRIKLSDKVRKLRSKFLSLYNNknIKNRKNGVNLCGYERVLYD 138
                     689****************99888756555334457777788899***********************9766554478888888888999999** PP

          DUF573  91 lskkiW 96 
                     l +kiW
  Zosma8g00670.1 139 LGRKIW 144
                     *****9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.1E-1245144IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MAESENPTLA VLFVKPLRSK PMKNNNKNHN IALSPPPTSS SSYRKMWTEE ESIVILNGLV  60
EFKATHNESR APCNLAEYDI LRDHLLSKKS ITGDFDRIKL SDKVRKLRSK FLSLYNNKNI  120
KNRKNGVNLC GYERVLYDLG RKIWVNGNTK SVDGEEVVRE IDSDGLKNST KHVNYLDGDD  180
DDVYTDDDDC IGGKKEKKIV DVDDGDDSAQ GVLPPCAVLK NVVKNLEKND ELIMQGTLKL  240
ALQMMKPERQ KAWDEKWTNQ CLVETQAFKK RKVLEKNLVE ELEEIFIKTN QNLT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9NLF70.0A0A0K9NLF7_ZOSMR; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.11e-08DNA-binding storekeeper protein-related transcriptional regulator