PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma8g01730.1
Common NameZOSMA_8G01730
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 162aa    MW: 18925.6 Da    PI: 9.4286
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma8g01730.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.56.2e-1374121552
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                     ++ rr+++NRe+ArrsR RK++ ++eL   vk L   N++L +e+++ 
  Zosma8g01730.1  74 RKRRRMISNRESARRSRMRKQKHLDELWLQVKHLLVINQKLVEEINRV 121
                     5789*****************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-1270134IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1472135IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-1274124No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-974129No hitNo description
PfamPF001704.7E-1074122IPR004827Basic-leucine zipper domain
CDDcd147027.90E-1675121No hitNo description
PROSITE patternPS0003607792IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MQPLEDVSNI QYILRPPTMD STCCFDMNSF LTHSHDPSCA ITSSVKKSPA TCRSNESSSG  60
ETVDEQRRRL INERKRRRMI SNRESARRSR MRKQKHLDEL WLQVKHLLVI NQKLVEEINR  120
VVANHDHLVI ENSQLRNNKS VLRQILLDFG VEEKIFTLEE R*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17377RKRRR
27394RKRRRMISNRESARRSRMRKQK
38693RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9NJT11e-114A0A0K9NJT1_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.19e-21basic leucine-zipper 42