PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00003.1.g00570.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 103aa    MW: 11090.3 Da    PI: 8.5371
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00003.1.g00570.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.11.2e-0628701454
                                  HHHHHHHHHHHCTSCCC.....TTS-STCHHHHHHHHHHHHHH CS
                           HLH 14 driNsafeeLrellPkas..kapskKlsKaeiLekAveYIksL 54
                                  d+i + +++L+ llP+++  ++++ + s a +L+ ++ YI+sL
  Zpz_sc00003.1.g00570.1.sm.mk 28 DQISELLSKLQALLPESTqaRNGAHRGSAARVLQDTCSYIRSL 70
                                  6899************7756777778***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.471470IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.42E-82888IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-82874IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0009826Biological Processunidimensional cell growth
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    Send to blast
MSSGRRTRPR RAGSTLSSSS SRSTISEDQI SELLSKLQAL LPESTQARNG AHRGSAARVL  60
QDTCSYIRSL HQEVDSLSET LAELLSSADV TSDQAAVIRS LLM
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination (By similarity). {ECO:0000250}.
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination. {ECO:0000269|PubMed:20009022}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00003.1.g00570.1.sm.mk
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By epibrassinolide. {ECO:0000269|PubMed:20009022}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0965981e-76FP096598.1 Phyllostachys edulis cDNA clone: bphyst010g20, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002448623.13e-43transcription factor ILI1
RefseqXP_006652899.13e-43PREDICTED: transcription factor ILI1
SwissprotA2XY473e-42ILI1_ORYSI; Transcription factor ILI1
SwissprotQ7X7423e-42ILI1_ORYSJ; Transcription factor ILI1
TrEMBLC5Y8Z37e-42C5Y8Z3_SORBI; Uncharacterized protein
TrEMBLJ3M1V86e-42J3M1V8_ORYBR; Uncharacterized protein
STRINGOB04G33830.11e-42(Oryza brachyantha)
STRINGSb06g030340.11e-42(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122932837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.12e-17activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1