PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00004.1.g01440.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family EIL
Protein Properties Length: 665aa    MW: 73566 Da    PI: 7.4261
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00004.1.g01440.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3508.23.8e-155714591354
                                   XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                          EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgii 77 
                                   eel++rmw+d+m+lkrl+e ++ + +d+ +      g++k ++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgii
  Zpz_sc00004.1.g01440.1.am.mk  71 EELERRMWRDRMKLKRLRELQQTRGKDQASGgsggDGSSKPRQSQEQARRKKMSRAQDGILKYMLKMMEVCRAQGFVYGII 151
                                   8*******************9999988877688877899999*************************************** PP

                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS- CS
                          EIN3  78 pekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdpp 158
                                   pekgkpv+gasd+LraWWkekv+fdrngpaai+kyqa+n+i+++es+l + + +++hsl+elqDTtlgSLLsalmqhcdpp
  Zpz_sc00004.1.g01440.1.am.mk 152 PEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADNAIPGSESELAS-GAASPHSLQELQDTTLGSLLSALMQHCDPP 231
                                   ************************************************66.****************************** PP

                                   TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT-- CS
                          EIN3 159 qrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkms 239
                                   qrr+plekgv+pPWWPtG+e+ww+elg++k+qg+ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+
  Zpz_sc00004.1.g01440.1.am.mk 232 QRRYPLEKGVPPPWWPTGDEEWWPELGIPKEQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMT 312
                                   ********************************************************************************* PP

                                   SHHHHHHHHHHTTTTT-S--XXXXXX...XXXX...XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX............ CS
                          EIN3 240 akesfallsvlnqeekecatvsahss...slrk...qspkvtlsceqkedvegkkeskikhvqavktta............ 302
                                   ake  ++l+v +qee+++ ++++  +   s+     ++ ++++s+ +++dv+  ++ k  ++ ++kt+             
  Zpz_sc00004.1.g01440.1.am.mk 313 AKEISTWLAVAKQEEELYMKLHPGARpptST-GgiaSAISLNASS-SEYDVDLAEDCKGDEAGNQKTAVsdptafnlgaai 391
                                   ***********************94433332.2332445555554.599***8888888888888887799999******* PP

                                   ................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS
                          EIN3 303 ................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqney 354
                                                   +++++ kr+++ s +   + ++ ++tc++ q+++s+   +f d+n++++++y
  Zpz_sc00004.1.g01440.1.am.mk 392 lndkfllptpmkeetaDVDFTPKRNAPASAEPELMLNNRVYTCNNVQCPHSDCGYGFLDRNARNSHQY 459
                                   *************************987765555555567**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048735.6E-13271327No hitNo description
Gene3DG3DSA:1.10.3180.105.6E-74201335IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167686.8E-61206331IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 665 aa     Download sequence    Send to blast
MGGSLMVDQS MTFPGQNGAG VEKNLGSGPL MSQTSSGEQC LMGEGDLVDP PPDSFPDAGE  60
DDSDDDVEDI EELERRMWRD RMKLKRLREL QQTRGKDQAS GGSGGDGSSK PRQSQEQARR  120
KKMSRAQDGI LKYMLKMMEV CRAQGFVYGI IPEKGKPVSG ASDNLRAWWK EKVRFDRNGP  180
AAIAKYQADN AIPGSESELA SGAASPHSLQ ELQDTTLGSL LSALMQHCDP PQRRYPLEKG  240
VPPPWWPTGD EEWWPELGIP KEQGPPPYKK PHDLKKAWKV SVLTAVIKHM SPDIEKIRRL  300
VRQSKCLQDK MTAKEISTWL AVAKQEEELY MKLHPGARPP TSTGGIASAI SLNASSSEYD  360
VDLAEDCKGD EAGNQKTAVS DPTAFNLGAA ILNDKFLLPT PMKEETADVD FTPKRNAPAS  420
AEPELMLNNR VYTCNNVQCP HSDCGYGFLD RNARNSHQYT CKYNDPLSQS AENKPPPAPP  480
QVFPATFNQP NQSLNNLDFN LPMDGQRSIA ELMNMYDNNF MNKTIGSDSH LGLLSRVVVQ  540
CPGTDSEDGR MDHCLKEKGK WARPSWPPTR LPESNGRDCE RTRVHRRGAE GSPAPLERVK  600
SYPVESATRA LLLPAWFFRP VTTRSAPIPT RRGGILIPHV RSRASAFRAV GECNRVACQR  660
AYVLA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-722043351132Protein ETHYLENE INSENSITIVE 3
4zds_B2e-722043351132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:30002253}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00004.1.g01440.1.am.mk
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0749710.0AB074971.2 Oryza sativa Japonica Group OsEIL1 mRNA for ethylene-insensitive-3-like protein, complete cds.
GenBankAC1186740.0AC118674.3 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence.
GenBankAC1370700.0AC137070.2 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence.
GenBankAK1032270.0AK103227.1 Oryza sativa Japonica Group cDNA clone:J033123C05, full insert sequence.
GenBankAP0149590.0AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
GenBankCP0126110.0CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
GenBankDQ1532450.0DQ153245.1 Oryza sativa (japonica cultivar-group) EIN3-like protein 1 (EIL1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004984528.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3M00.0EIL1B_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1b
TrEMBLK4A6W10.0K4A6W1_SETIT; Uncharacterized protein
STRINGSi034617m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-159EIL family protein
Publications ? help Back to Top
  1. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]