PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00015.1.g00310.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 504aa MW: 54094.8 Da PI: 10.8982

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00015.1.g00310.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	31.5	3.9e-10	477	501	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r++W+peLH+rFv a+++LGG++ Zpz_sc00015.1.g00310.1.am.mk 477 KARRCWSPELHRRFVAALQRLGGAQ 501 68*********************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.4E-8	474	501	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence Send to blast
MKLTQGHVRW LVILYYNKSA PRLPNNQTNA EKSPIPRSSP SFWACVDNKN KRHAEFILQE 60 THNAKHQPFH SKVASDGPRS ILLSISLQLA LDLPRDLAFS SSTSPYQLGV FPLCKCAVHG 120 MPDLELSAKR HGSWKARQEP VLVRPKNSGL HFQHVATNSL VIPWFIIDLC PIEGTSRGGR 180 SADAVTGRLV PVTRRNASAP AAAAAASFLP FPIANLPSYP CPPRYGHTSS PRSDRPALLA 240 TTSPAPSRPA GINGRPAAAA AAAAAPTPFP PSSTLLLLLL VGSRWGWGRR TRGRWRRARV 300 EECVRGLEAE KAKMEAFRRE LPVSVRLVAD GALACSGSGL IEWLKDELAQ LRCPAPELFA 360 PVAAQAKTKA APDGGRTEAD DKRSWMSSAQ LWSCGSLDDS TGNSNGAKKA AHKVLNASMP 420 LNGLPAMARS TDAAATPLPD LSLSSPAMAV TRPAAPSATS SAVTDAGAQR HPQAQRKARR 480 CWSPELHRRF VAALQRLGGA QGEH

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence Send to blast

MKLTQGHVRW LVILYYNKSA PRLPNNQTNA EKSPIPRSSP SFWACVDNKN KRHAEFILQE  60
THNAKHQPFH SKVASDGPRS ILLSISLQLA LDLPRDLAFS SSTSPYQLGV FPLCKCAVHG  120
MPDLELSAKR HGSWKARQEP VLVRPKNSGL HFQHVATNSL VIPWFIIDLC PIEGTSRGGR  180
SADAVTGRLV PVTRRNASAP AAAAAASFLP FPIANLPSYP CPPRYGHTSS PRSDRPALLA  240
TTSPAPSRPA GINGRPAAAA AAAAAPTPFP PSSTLLLLLL VGSRWGWGRR TRGRWRRARV  300
EECVRGLEAE KAKMEAFRRE LPVSVRLVAD GALACSGSGL IEWLKDELAQ LRCPAPELFA  360
PVAAQAKTKA APDGGRTEAD DKRSWMSSAQ LWSCGSLDDS TGNSNGAKKA AHKVLNASMP  420
LNGLPAMARS TDAAATPLPD LSLSSPAMAV TRPAAPSATS SAVTDAGAQR HPQAQRKARR  480
CWSPELHRRF VAALQRLGGA QGEH

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00015.1.g00310.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5582	33	53

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	3e-14	G2-like family protein