PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00015.1.g00320.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 108aa    MW: 11381.1 Da    PI: 4.8385
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00015.1.g00320.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.96.9e-111213656
                       G2-like 36 mkvkgLtlehvkSHLQkYRla 56
                                  mkv+gLt+++vkSHLQkYRl+
  Zpz_sc00015.1.g00320.1.am.mk  1 MKVDGLTNDEVKSHLQKYRLH 21
                                  9******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015575.2E-8121IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.607.7E-10124IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
MKVDGLTNDE VKSHLQKYRL HTRRASSSDG GDVGQAAMAP EQQCATSQHS TSQSGSPQGP  60
LQLTLSSQGA ASVTGGDSCD GDEEDEDGKS EGYNCREMQR RGTKTSSS
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00015.1.g00320.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004963026.12e-37transcription factor HHO3
TrEMBLA0A0A9CL962e-43A0A0A9CL96_ARUDO; Uncharacterized protein
STRINGPavir.J13382.1.p2e-38(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55823353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49560.11e-12G2-like family protein