PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00020.1.g00870.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 374aa MW: 40128 Da PI: 8.7511

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00020.1.g00870.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	35.4	2.4e-11	72	97	2	27
G2-like 2 prlrWtpeLHerFveaveqLGGsekA 27 pr+rWt+ LH++Fv+ave LGG+e A Zpz_sc00020.1.g00870.1.am.mk 72 PRMRWTTALHAHFVHAVELLGGHETA 97 9**********************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.4E-8	69	97	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence Send to blast
MSSAAATGVT PDLSLHISPP SPAAGGGATP EGLDAAQRSL RAQQRLHQPN QTAHGFKKSS 60 SSGGGKRSSR APRMRWTTAL HAHFVHAVEL LGGHETALVQ TTYVYGLQCD DQTYEDSISL 120 PPPKPAASIV FLMVPRSQPA QPSAAALLII RRIQIRSTSI VPLPVPGPIS CNSRWNLGKS 180 QSPAEQQQQQ QQLEHHNAAW IQALLVQHQL PSTCRTVLPH QYIRLQPDRL FMEQRQRQKG 240 GGAQDHREGA VAHDLAEAGR PAINQKGLSA PPTSLVHDAE TVVRGPPSSS NTSSSGDTAS 300 SSDWLQQQTL LMPASTQRYG SNGAITWLTS TTPPPPTLEM SLGRQGWQVE QQCGGGGEFE 360 PAPSAKDRTL LECL

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence Send to blast

MSSAAATGVT PDLSLHISPP SPAAGGGATP EGLDAAQRSL RAQQRLHQPN QTAHGFKKSS  60
SSGGGKRSSR APRMRWTTAL HAHFVHAVEL LGGHETALVQ TTYVYGLQCD DQTYEDSISL  120
PPPKPAASIV FLMVPRSQPA QPSAAALLII RRIQIRSTSI VPLPVPGPIS CNSRWNLGKS  180
QSPAEQQQQQ QQLEHHNAAW IQALLVQHQL PSTCRTVLPH QYIRLQPDRL FMEQRQRQKG  240
GGAQDHREGA VAHDLAEAGR PAINQKGLSA PPTSLVHDAE TVVRGPPSSS NTSSSGDTAS  300
SSDWLQQQTL LMPASTQRYG SNGAITWLTS TTPPPPTLEM SLGRQGWQVE QQCGGGGEFE  360
PAPSAKDRTL LECL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00020.1.g00870.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP27424	4	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17695.1	2e-10	G2-like family protein