PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc00021.1.g00110.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 217aa MW: 24371.7 Da PI: 9.2983

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc00021.1.g00110.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	35.6	1.8e-11	85	127	10	52
RWP-RK 10 lskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + + ++++kdAA eLg+ + LK C +G++RWP ++sl Zpz_sc00021.1.g00110.1.am.mk 85 VLAVLHMHLKDAADELGITMCHLKFVCHSNGLHRWPGKTVRSL 127 55678*******************************9999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	11.16	52	147	IPR003035	RWP-RK domain
Pfam	PF02042	1.6E-9	84	127	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MPKSLQRASR LRCAASSTAQ YESNGYEDSH REDRDCGPVL FKRQETLHQS NQPDSLAPST 60 KKKLSDLVVV TMPRRRGPSP PWSDVLAVLH MHLKDAADEL GITMCHLKFV CHSNGLHRWP 120 GKTVRSLNAR LDRLIREAAM EKASPGALPR WADHRRRTLS KIAQEARTVI RELDNIYERI 180 RNPVPELPAP EPEVDGDGTM NLIDSVGVSS GTRENNI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc00021.1.g00110.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP18443	5	9