PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00028.1.g00050.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 157aa    MW: 17036.3 Da    PI: 10.4296
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00028.1.g00050.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.4e-114185549
                                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                                  ++ +rk++NR++A+rsR+RK+ +++ L+  v++L a N aL k +
  Zpz_sc00028.1.g00050.1.sm.mk 41 RKRKRKESNRLSAQRSRARKQRQLDDLTAHVAALRARNGALTKAA 85
                                  6789************************************99765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-93383No hitNo description
SMARTSM003381.2E-837101IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.7143983IPR004827Basic-leucine zipper domain
PfamPF001704.0E-94084IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.38E-84186No hitNo description
CDDcd147021.16E-134292No hitNo description
PROSITE patternPS0003604459IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MASPGMMSST VTASPSPSPA GSDSAYQAQH AAVPASVTEE RKRKRKESNR LSAQRSRARK  60
QRQLDDLTAH VAALRARNGA LTKAAHDAVR RCVAVQAENE MLRARSLELG ARLQSLLQLI  120
QYMDAATSAL AVYDPSPFAG AMLHQQPLLD ATMYNYN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14045RKRKRK
24046RKRKRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc00028.1.g00050.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9425764e-62EU942576.1 Zea mays clone 1520176 mRNA sequence.
GenBankEU9732984e-62EU973298.1 Zea mays clone 396372 common plant regulatory factor 7 mRNA, complete cds.
GenBankKJ7283834e-62KJ728383.1 Zea mays clone pUT6666 bZIP transcription factor (bZIP21) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004968894.15e-44ocs element-binding factor 1
TrEMBLA0A1E5VQF26e-45A0A1E5VQF2_9POAL; Uncharacterized protein
STRINGPavir.Ea01670.1.p1e-43(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137572428
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-12basic leucine-zipper 44